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Atomic transport underpins the performance of materials in technologies such as energy storage and electronics, yet its simulation remains computationally demanding. In particular, modeling ionic diffusion in solid-state electrolytes (SSEs)…

Materials Science · Physics 2025-10-21 Juno Nam , Sulin Liu , Gavin Winter , KyuJung Jun , Soojung Yang , Rafael Gómez-Bombarelli

The transport of biomolecules across a cell membrane is an important phenomena that plays a pivotal role in the functioning of biological cells. In this paper, we investigate such processes by modeling the translocation of polymers through…

Soft Condensed Matter · Physics 2022-11-01 Andri Sharma

In models of fast magnetic reconnection, flux transfer occurs within a small portion of a current sheet triggering stored magnetic energy to be thermalized by shocks. When the initial current sheet separates magnetic fields which are not…

Solar and Stellar Astrophysics · Physics 2015-05-19 D. W. Longcope , S. J. Bradshaw

We study the translocation of a semiflexible polymer through a conical channel with attractive surface interactions and a driving force which varies spatially inside the channel. Using the results of the translocation dynamics of a flexible…

Soft Condensed Matter · Physics 2022-11-15 Andri Sharma , Rajeev Kapri , Abhishek Chaudhuri

A circular Hele-Shaw cell bounded by a volumetrically confined elastic solid can act as a fluidic fuse: during radially outward fluid flow, the solid deforms in response to the viscous pressure field such that the gap expands near the inlet…

Fluid Dynamics · Physics 2022-12-15 Gunnar G. Peng , Callum Cuttle , Christopher W. MacMinn , Draga Pihler-Puzovic

Active gels are a class of biologically-relevant material containing embedded agents that spontaneously generate forces acting on a sparse filament network. In vitro experiments of protein filaments and molecular motors have revealed a…

Soft Condensed Matter · Physics 2024-06-03 David A. Head , Gerhard Gompper , W. J. Briels

Recent experiments of translocation of double stranded DNA through nanopores [M. Wanunu \textit{et al.} Nature Nanotech. {\bf 5}, 160 (2010)] reveal that the DNA capture rate can be significantly influenced by a salt gradient across the…

Soft Condensed Matter · Physics 2015-03-17 Marius M. Hatlo , Debabrata Panja , René van Roij

In living systems, DNA undergoes continuous and rhythmic mechanical remodeling through condensation, looping, and disentangling to regulate gene expression, segregate chromosomes, and guide morphogenesis. Here, we demonstrate a purely…

Soft Condensed Matter · Physics 2025-12-01 Maya Levanon , Noa S. Goldberg , Dvir Cohen , Eran Bouchbinder , Ram M. Adar , Alexandra M. Tayar

Based on the properties of large-scale plume currents, an injection/suction control strategy is introduced to enhance the strength of plume currents and the turbulent transport of passive scalar in rotating plane Poiseuille flow. The…

Fluid Dynamics · Physics 2022-01-25 Shengqi Zhang , Zhenhua Xia , Shiyi Chen

By revisiting the century-old problem of water bridge, we demonstrate that it is in fact dynamic and comprises of two coaxial water currents that carry different charges and flow in opposite directions. This spontaneous separation is…

Directional and self-propelled flow in open channels has a variety of applications, including microfluidic and medical devices, industrial filtration processes, fog-harvesting and condensing apparatuses. Here, we present versatile…

Fluid Dynamics · Physics 2022-10-07 Camilla Sammartino , Michael Rennick , Halim Kusumaatmaja , Bat-El Pinchasik

We derive an exact solution for Stokes flow in an in a channel with permeable walls. We assume that at the channel walls, the normal component of the fluid velocity is described by Darcy's law and the tangential component of the fluid…

Fluid Dynamics · Physics 2015-11-03 Gregory J. Herschlag , Jian-Guo Liu , Anita T. Layton

A flexible membrane deforming its shape in time can self-propel in a viscous fluid. Alternatively, if the membrane is anchored, its deformation will lead to fluid transport. Past work in this area focused on situations where the deformation…

Soft Condensed Matter · Physics 2013-02-12 Arthur A. Evans , Eric Lauga

Microdialysis is a well-established method for in vivo neurochemical measurements of small molecules, with implanted concentric-design probes offering minimized tissue damage and good temporal and spatial resolution. However, the large…

Quantitative Methods · Quantitative Biology 2021-09-10 Damon Vinciguerra , Margot Vigeant , Ewan C. McNay

Transport of molecules across membrane channels is investigated theoretically using exactly solvable discrete stochastic site-binding models. It is shown that the interaction potential between molecules and the channel has a strong effect…

Soft Condensed Matter · Physics 2009-11-11 Anatoly B. Kolomeisky

We investigate the shallow flow of viscous fluid into and out of a channel whose gap width increases as a power-law ($x^n$), where $x$ is the downstream axis. The fluid flows slowly, while injected at a rate in the form of $t^\alpha$, where…

Fluid Dynamics · Physics 2023-12-13 M-S. Liu , H. E. Huppert

We numerically study the dynamics of a passive fluid droplet confined within a microchannel whose walls are covered with a thin layer of active gel. The latter represents a fluid of extensile material modelling, for example, a suspension of…

Soft Condensed Matter · Physics 2023-08-10 A. Tiribocchi , M. Durve , M. Lauricella , A. Montessori , S. Succi

Oscillating sharp edges have been employed to achieve rapid and homogeneous mixing in microchannels using acoustic streaming. Here we use a perturbation approach to study the flow around oscillating sharp edges in a microchannel. This work…

Fluid Dynamics · Physics 2014-02-19 Nitesh Nama , Po-Hsun Huang , Tony Jun Huang , Francesco Costanzo

A simple model for the reaction-driven propulsion of a small device is proposed as a model for (part of) a molecular machine in aqueous media. Motion of the device is driven by an asymmetric distribution of reaction products. The propulsive…

Soft Condensed Matter · Physics 2009-11-13 Ramin Golestanian , Tanniemola B. Liverpool , Armand Ajdari

We investigate the diffusiophoresis of a non-polarizable droplet laden with soluble ionic surfactant, for which the surface charge arises from adsorption of surfactant at the fluid-fluid interface. Unlike previous studies that assume either…

Fluid Dynamics · Physics 2026-02-09 Subrata Majhi , Somnath Bhattacharyya
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