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We demonstrate that autocatalytic reactions, where a product catalyzes its own formation, can be significantly accelerated when the product molecules are indistinguishable from each other. This ``combinatorial enhancement," analogous to the…

Statistical Mechanics · Physics 2025-03-19 Nanako Hirano , Akira Yoshida , Takenobu Nakamura , Naoko Nakagawa

This paper extends the Karhunen-Loeve representation from classical Gaussian random processes to quantum Wiener processes which model external bosonic fields for open quantum systems. The resulting expansion of the quantum Wiener process in…

Probability · Mathematics 2019-04-09 Igor G. Vladimirov , Ian R. Petersen , Matthew R. James

The origin of stochastic fluctuations in gene expression has received considerable attention recently. Fluctuations in gene expression are particularly pronounced in cellular systems because of the small copy number of species undergoing…

Subcellular Processes · Quantitative Biology 2009-08-02 P. S. Gutierrez , D. Monteoliva , L. Diambra

We study the synchronization of Kuramoto oscillators with all-to-all coupling in the presence of slow, noisy frequency adaptation. In this paper we develop a new model for oscillators which adapt both their phases and frequencies. It is…

Statistical Mechanics · Physics 2015-05-13 Dane Taylor , Edward Ott , Juan G. Restrepo

A stochastic subgrid-scale parameterization based on the Ruelle's response theory and proposed in Wouters and Lucarini [2012] is tested in the context of a low-order coupled ocean-atmosphere model for which a part of the atmospheric modes…

Atmospheric and Oceanic Physics · Physics 2017-01-18 Jonathan Demaeyer , Stéphane Vannitsem

We present a model-based output-only method for identifying from time series the parameters governing the dynamics of stochastically forced oscillators. In this context, suitable models of the oscillator's damping and stiffness properties…

Fluid Dynamics · Physics 2019-10-04 Edouard Boujo , Nicolas Noiray

Because of the broken time-translation symmetry, in periodically driven vibrational systems fluctuations of different vibration components have different intensities. Fluctuations of one of the components are often squeezed, whereas…

Mesoscale and Nanoscale Physics · Physics 2020-06-26 J. S. Huber , G. Rastelli , M. J. Seitner , J. Kölbl , W. Belzig , M. I. Dykman , E. M. Weig

The time-dependent probability density function of a system evolving towards a stationary state exhibits an oscillatory behavior if the eigenvalues of the corresponding evolution operator are complex. The frequencies \omega_n, with which…

Statistical Mechanics · Physics 2012-06-22 R. Salgado-Garcia

Building upon the eco-evolutionary game dynamics framework established by Tilman et al., we investigate stochastic fluctuations in a two-strategy system incorporating environmental feedback mechanisms, where the payoff matrix exhibits…

Populations and Evolution · Quantitative Biology 2025-12-01 Chao Wang , Minlan Li , Chang Liu

We investigate the statistical properties of the complexness parameter which characterizes uniquely complexness (biorthogonality) of resonance eigenstates of open chaotic systems. Specifying to the regime of isolated resonances, we apply…

Other Condensed Matter · Physics 2009-11-10 Charles Poli , Dmitry Savin , Olivier Legrand , Fabrice Mortessagne

Spiky oscillations are characterized by slow-fast dynamics and are observed in excitable media such as neuronal membranes and cardiac cells. In a turbulent reactive flow system, we observe that the heat release rate exhibits self-sustained…

Fluid Dynamics · Physics 2025-11-21 Sivakumar Sudarsanan , Manikandan Raghunathan , Shwetha Viswesh , R. I. Sujith

We demonstrate a novel algorithm for generating stationary stochastic signals with a specified power spectral density (or equivalently, via the Wiener-Khinchin relation, a specified autocorrelation function) while satisfying constraints on…

Signal Processing · Electrical Eng. & Systems 2020-10-15 Span Spanbauer , Ian Hunter

Unlike macroscopic engines, the molecular machinery of living cells is strongly affected by fluctuations. Stochastic Thermodynamics uses Markovian jump processes to model the random transitions between the chemical and configurational…

Statistical Mechanics · Physics 2015-10-19 Bernhard Altaner , Artur Wachtel , Jürgen Vollmer

Strong frequency dependence is unlikely in diffusive or over-damped systems. When exceptions do occur, such as in the case of stochastic resonance, it signals an interesting underlying phenomenon. We find that such a case appears in the…

Statistical Mechanics · Physics 2015-12-11 Ayse Ferhan Yesil , M. Cemal Yalabik

We study the dynamics of atoms interacting periodically with a dissipative optical cavity and employ Floquet theory to analyze their low-frequency behavior. By means of an effective atom-only master equation, valid in the bad cavity regime,…

Quantum Physics · Physics 2025-06-17 Gage W. Harmon , Giovanna Morigi , Simon B. Jäger

Stochastic quantization in physics has been considered to provide a path integral representation of a probability distribution for Ito processes. It has been indicated that the stochastic quantization can involve a potential term, if the…

Systems and Control · Computer Science 2020-05-05 Masakazu Sano

We analyzed the stochastic behavior of systems controlled by autocatalytic reaction A+X -> X+X, X+X -> A+X, X -> B provided that the distribution of reacting particles in the system volume is uniform, i.e. the point model of reaction…

Statistical Mechanics · Physics 2016-08-31 L. Pal

We study a non Markovian three state model, subjected to an external periodic signal. This model is intended to describe an excitable systems with periodical driving. In the limit of a small amplitude of the external signal we derive…

Statistical Mechanics · Physics 2009-11-10 T. Prager , L. Schimansky-Geier

Time-resolved optical lineshapes are calculated using a second-order inhomogeneous cumulant expansion. The calculation shows that in the inhomogeneous limit the optical spectra are determined solely by two-time correlation functions.…

Condensed Matter · Physics 2009-11-07 Gregor Diezemann

A general approach to consider spatially extended stochastic systems with correlations between additive and multiplicative noises subject to nonlinear damping is developed. Within modified cumulant expansion method, we derive an effective…

Statistical Mechanics · Physics 2009-11-10 A. I. Olemskoi , D. O. Kharchenko , I. A. Knyaz'