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The source term in a reaction-diffusion system, in general, does not involve explicit time dependence. A class of self-limiting growth models dealing with animal and tumor growth and bacterial population in a culture, on the other hand are…

Biological Physics · Physics 2009-11-07 Sandip Kar , Suman Kumar Banik , Deb Shankar Ray

We study three basic diffusion-controlled reaction processes -- annihilation, coalescence, and aggregation. We examine the evolution starting with the most natural inhomogeneous initial configuration where a half-line is uniformly filled by…

Statistical Mechanics · Physics 2015-05-13 P. L. Krapivsky , E. Ben-Naim

We study the long-time behavior of the solutions of a two-component reaction-diffusion system on the real line, which describes the basic chemical reaction $A <=> 2 B$. Assuming that the initial densities of the species $A, B$ are bounded…

Analysis of PDEs · Mathematics 2021-06-30 Thierry Gallay , Sinisa Slijepcevic

Diffusion-limited association reactions are ubiquitous in nature. They are particularly important for biological reactions, where the reaction rates are often determined by the diffusive transport of the molecules on two-dimensional…

Soft Condensed Matter · Physics 2020-10-06 Sumantra Sarkar

For reaction-diffusion processes without exclusion, in which the particles can exist in the same site of a one-dimensional lattice, we study all the integrable models which can be obtained by imposing a boundary condition on the master…

Statistical Mechanics · Physics 2009-11-11 M. Alimohammadi

The boundary integral method is extended to derive closed integro-differential equations applicable to computation of the shape and propagation speed of a steadily moving spot and to the analysis of dynamic instabilities in the sharp…

Pattern Formation and Solitons · Physics 2016-09-07 L. M. Pismen

The radiation (reaction, Robin) boundary condition for the continuum diffusion equation is widely used in chemical and biological applications to express reactive boundaries. The underlying trajectories of the diffusing particles are…

Mathematical Physics · Physics 2007-09-02 A. Singer , Z. Schuss , D. Holcman

Models of reaction diffusion processes usually employ discrete lattice models with particles interacting at the same site, resulting in localized reactions in the continuum limit. Here, various non-local interactions are considered, and two…

Mathematical Physics · Physics 2026-03-30 Chris D Greenman

Healthy and sick individuals (A and B particles) diffuse independently with diffusion constants D_A and D_B. Sick individuals upon encounter infect healthy ones (at rate k), but may also spontaneously recover (at rate 1/\tau). The…

Statistical Mechanics · Physics 2015-06-25 F. van Wijland , K. Oerding , H. J. Hilhorst

On example of diffusion-limited reversible $A+A \rightleftharpoons B$ reactions we re-examine two fundamental concepts of classical chemical kinetics - the notion of "Chemical Equilibrium" and the "Law of Mass Action". We consider a general…

Statistical Mechanics · Physics 2009-11-11 R. Voituriez , M. Moreau , G. Oshanin

Many processes in cell biology involve diffusion in a domain $\Omega$ that contains a target $\calU$ whose boundary $\partial \calU$ is a chemically reactive surface. Such a target could represent a single reactive molecule, an…

Statistical Mechanics · Physics 2022-01-06 Paul C. Bressloff

To capture the dynamic behaviors of reaction-subdiffusion in flow fields, in the present paper we analyze a simple monomolecular conversion A $\rightarrow$ B. We derive the corresponding master equations for the distribution of A and B…

Fluid Dynamics · Physics 2018-10-24 Hong Zhang , Guohua Li

In particle-based stochastic reaction-diffusion models, reaction rate and placement kernels are used to decide the probability per time a reaction can occur between reactant particles, and to decide where product particles should be placed.…

Quantitative Methods · Quantitative Biology 2022-06-08 Ying Zhang , Samuel A. Isaacson

Consider a one dimensional diffusion process on the diffusion interval $I$ originated in $x_0\in I$. Let $a(t)$ and $b(t)$ be two continuous functions of $t$, $t>t_0$ with bounded derivatives and with $a(t)<b(t)$ and $a(t),b(t)\in I$,…

Probability · Mathematics 2014-03-10 Laura Sacerdote , Ottavia Telve , Cristina Zucca

We study the effect of confinement on diffusion limited bimolecular reactions within a lattice model where a small number of reactants diffuse amongst a much larger number of inert particles. When the number of inert particles is held…

Soft Condensed Matter · Physics 2013-05-29 Jeremy D. Schmit , Ercan Kamber , Jané Kondev

We study a reaction diffusion system where we consider a non-gaussian process instead of a standard diffusion. If the process increments follow a probability distribution with tails approaching to zero faster than a power law, the usual…

Cellular Automata and Lattice Gases · Physics 2009-11-07 Rosaria Mancinelli , Davide Vergni , Angelo Vulpiani

Chemical reactions involving diffusion of reactants and subsequent chemical fixation steps are generally termed "diffusion-influenced" (DI). Virtually all biochemical processes in living media can be counted among them, together with those…

Chemical Physics · Physics 2016-06-29 Marta Galanti , Duccio Fanelli , Francesco Piazza

An explicit output-feedback boundary feedback law is introduced that stabilizes an unstable linear constant-coefficient reaction-diffusion equation on an $n$-ball (which in 2-D reduces to a disk and in 3-D reduces to a sphere) using only…

Optimization and Control · Mathematics 2015-11-23 Rafael Vazquez , Miroslav Krstic

A class of Brownian dynamics algorithms for stochastic reaction-diffusion models which include reversible bimolecular reactions is presented and analyzed. The method is a generalization of the $\lambda$--$\newrho$ model for irreversible…

Biological Physics · Physics 2010-05-12 J. Lipkova , K. C. Zygalakis , S. J. Chapman , R. Erban

We briefly review some aspects of the anomalous diffusion, and its relevance in reactive systems. In particular we consider {\it strong anomalous} diffusion characterized by the moment behaviour $\langle x(t)^q \rangle \sim t^{q \nu(q)}$,…

Statistical Mechanics · Physics 2016-09-06 Fabio Cecconi , Davide Vergni , Angelo Vulpiani