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We tackle the network topology inference problem by utilizing Laplacian constrained Gaussian graphical models, which recast the task as estimating a precision matrix in the form of a graph Laplacian. Recent research \cite{ying2020nonconvex}…

Machine Learning · Computer Science 2023-09-06 Jiaxi Ying , Xi Han , Rui Zhou , Xiwen Wang , Hing Cheung So

Graphs are an intuitive way to represent relationships between variables in fields such as finance and neuroscience. However, these graphs often need to be inferred from data. In this paper, we propose a novel framework to infer a latent…

Methodology · Statistics 2024-10-25 Jedidiah Harwood , Debashis Paul , Jie Peng

Latent factor models are the canonical statistical tool for exploratory analyses of low-dimensional linear structure for an observation matrix with p features across n samples. We develop a structured Bayesian group factor analysis model…

Methodology · Statistics 2015-11-12 Shiwen Zhao , Chuan Gao , Sayan Mukherjee , Barbara E Engelhardt

We develop latent variable models for Bayesian learning based low-rank matrix completion and reconstruction from linear measurements. For under-determined systems, the developed methods are shown to reconstruct low-rank matrices when…

Machine Learning · Statistics 2015-01-26 Martin Sundin , Cristian R. Rojas , Magnus Jansson , Saikat Chatterjee

Bayesian methods for learning Gaussian graphical models offer a principled framework for quantifying model uncertainty and incorporating prior knowledge. However, their scalability is constrained by the computational cost of jointly…

Methodology · Statistics 2025-08-28 Reza Mohammadi , Marit Schoonhoven , Lucas Vogels , S. Ilker Birbil

We explore various Bayesian approaches to estimate partial Gaussian graphical models. Our hierarchical structures enable to deal with single-output as well as multiple-output linear regressions, in small or high dimension, enforcing either…

Methodology · Statistics 2021-12-14 Eunice Okome Obiang , Pascal Jézéquel , Frédéric Proïa

Dynamic networks models describe a growing number of important scientific processes, from cell biology and epidemiology to sociology and finance. There are many aspects of dynamical networks that require statistical considerations. In this…

Methodology · Statistics 2012-05-15 E. C. Wit , A. Abbruzzo

Learning dependence relationships among variables of mixed types provides insights in a variety of scientific settings and is a well-studied problem in statistics. Existing methods, however, typically rely on copious, high quality data to…

Applications · Statistics 2019-07-25 Zehang Richard Li , Tyler H. McCormick , Samuel J. Clark

Gaussian graphical models are often used to infer gene networks based on microarray expression data. Many scientists, however, have begun using high-throughput sequencing technologies to measure gene expression. As the resulting…

Applications · Statistics 2012-05-30 Genevera I. Allen , Zhandong Liu

As a structured prediction task, scene graph generation aims to build a visually-grounded scene graph to explicitly model objects and their relationships in an input image. Currently, the mean field variational Bayesian framework is the de…

Computer Vision and Pattern Recognition · Computer Science 2022-01-28 Daqi Liu , Miroslaw Bober , Josef Kittler

Recently it has become popular to learn sparse Gaussian graphical models (GGMs) by imposing l1 or group l1,2 penalties on the elements of the precision matrix. Thispenalized likelihood approach results in a tractable convex optimization…

Machine Learning · Statistics 2012-05-14 Benjamin Marlin , Mark Schmidt , Kevin Murphy

We consider the problem of learning the structure of a pairwise graphical model over continuous and discrete variables. We present a new pairwise model for graphical models with both continuous and discrete variables that is amenable to…

Machine Learning · Statistics 2013-07-05 Jason D. Lee , Trevor J. Hastie

The sparse Cholesky parametrization of the inverse covariance matrix can be interpreted as a Gaussian Bayesian network; however its counterpart, the covariance Cholesky factor, has received, with few notable exceptions, little attention so…

Machine Learning · Statistics 2020-09-03 Irene Córdoba , Concha Bielza , Pedro Larrañaga , Gherardo Varando

We consider the problem of learning a Gaussian variational approximation to the posterior distribution for a high-dimensional parameter, where we impose sparsity in the precision matrix to reflect appropriate conditional independence…

Computation · Statistics 2019-04-23 Linda S. L. Tan , David J. Nott

Bayesian estimation of Gaussian graphical models has proven to be challenging because the conjugate prior distribution on the Gaussian precision matrix, the G-Wishart distribution, has a doubly intractable partition function. Recent…

Neurons and Cognition · Quantitative Biology 2014-09-10 Max Hinne , Alex Lenkoski , Tom Heskes , Marcel van Gerven

Recovering sparse conditional independence graphs from data is a fundamental problem in machine learning with wide applications. A popular formulation of the problem is an $\ell_1$ regularized maximum likelihood estimation. Many convex…

Machine Learning · Computer Science 2019-12-24 Harsh Shrivastava , Xinshi Chen , Binghong Chen , Guanghui Lan , Srinvas Aluru , Han Liu , Le Song

Conventional methods of estimating latent behaviour generally use attitudinal questions which are subjective and these survey questions may not always be available. We hypothesize that an alternative approach can be used for latent variable…

Machine Learning · Computer Science 2018-09-18 Melvin Wong , Bilal Farooq , Guillaume-Alexandre Bilodeau

We provide the first information theoretic tight analysis for inference of latent community structure given a sparse graph along with high dimensional node covariates, correlated with the same latent communities. Our work bridges recent…

Social and Information Networks · Computer Science 2018-07-26 Yash Deshpande , Andrea Montanari , Elchanan Mossel , Subhabrata Sen

Many modern spatial models express the stochastic variation component as a basis expansion with random coefficients. Low rank models, approximate spectral decompositions, multiresolution representations, stochastic partial differential…

Methodology · Statistics 2019-02-20 Mitchell Krock , William Kleiber , Stephen Becker

Let $X = \{X_{u}\}_{u \in U}$ be a real-valued Gaussian process indexed by a set $U$. It can be thought of as an undirected graphical model with every random variable $X_{u}$ serving as a vertex. We characterize this graph in terms of the…

Statistics Theory · Mathematics 2023-12-13 Kartik G. Waghmare , Victor M. Panaretos