English
Related papers

Related papers: Disordered driven lattice gases with boundary rese…

200 papers

Intracellular transport processes driven by molecular motors can be described by stochastic lattice models of self-driven particles. Here we focus on bidirectional transport models excluding the exchange of particles on the same track. We…

Biological Physics · Physics 2015-05-27 M. Ebbinghaus , C. Appert-Rolland , L. Santen

Describing particle transport at the macroscopic or mesoscopic level in non-ideal environments poses fundamental theoretical challenges in domains ranging from inter and intra-cellular transport in biology to diffusion in porous media. Yet,…

Statistical Mechanics · Physics 2013-09-11 Marta Galanti , Duccio Fanelli , Francesco Piazza

When particle flux is regulated by multiple factors such as particle supply and varying transport rate, it is important to identify the respective dominant regimes. We extend the well-studied totally asymmetric simple exclusion model to…

Statistical Mechanics · Physics 2013-10-30 L. Jonathan Cook , J. J. Dong , Alexander LaFleur

A unified theoretical description of ballistic and diffusive carrier transport in parallel-plane semiconductor structures is developed within the semiclassical model. The approach is based on the introduction of a thermo-ballistic current…

Materials Science · Physics 2009-11-10 R. Lipperheide , U. Wille

In random systems consisting of grains with size distributions the transport properties are difficult to explore by network models. However, the concentration dependence of effective conductivity and its critical properties can be…

Statistical Mechanics · Physics 2007-05-23 Ryszard Piasecki

We present Monte Carlo simulations of the lattice gas with nearest-neighbor exclusion and Kawasaki (hopping) dynamics, under the influence of a nonuniform drive, on the square lattice. The drive, which favors motion along the +$x$ and…

Statistical Mechanics · Physics 2009-11-11 Fabricio Q. Potiguar , Ronald Dickman

Many cellular processes rely on the cell's ability to transport material to and from the nucleus. Networks consisting of many microtubules and actin filaments are key to this transport. Recently, the inhibition of intracellular transport…

Subcellular Processes · Quantitative Biology 2020-05-06 Shawn D. Ryan , Zachary McCarthy , Mykhailo Potomkin

We propose and study a one-dimensional (1D) model consisting of two lanes with open boundaries. One of the lanes executes diffusive and the other lane driven unidirectional or asymmetric exclusion dynamics, which are mutually coupled…

Statistical Mechanics · Physics 2023-11-27 Atri Goswami , Utsa Dey , Sudip Mukherjee

The paper addresses the single-file diffusion in the presence of an absorbing boundary. The emphasis is on an interplay between the hard-core interparticle interaction and the absorption process. The resulting dynamics exhibits several…

Statistical Mechanics · Physics 2014-02-26 Artem Ryabov , Petr Chvosta

The one-dimensional symmetric exclusion process, the simplest interacting particle process, is a lattice-gas made of particles that hop symmetrically on a discrete line respecting hard-core exclusion. The system is prepared on the infinite…

Statistical Mechanics · Physics 2017-04-26 T. Imamura , K. Mallick , T. Sasamoto

Diffusive transport is a universal phenomenon, throughout both biological and physical sciences, and models of diffusion are routinely used to interrogate diffusion-driven processes. However, most models neglect to take into account the…

Quantitative Methods · Quantitative Biology 2015-10-28 Paul R. Taylor , Christian A. Yates , Matthew J. Simpson , Ruth E. Baker

We introduce a Monte Carlo algorithm to efficiently compute transport properties of chaotic dynamical systems. Our method exploits the importance sampling technique that favors trajectories in the tail of the distribution of displacements,…

Statistical Mechanics · Physics 2018-05-25 Diego Tapias , David P. Sanders , Eduardo G. Altmann

We present an analytical and numerical study of a nonlinear diffusion model which describes density relaxation of loosely packed particles under gravity and weak random (thermal) vibration, and compare the results with Monte Carlo…

Soft Condensed Matter · Physics 2009-11-10 Jeferson J. Arenzon , Yan Levin , Mauro Sellitto

The diffusive transport of particles in anisotropic media is a fundamental phenomenon in computational, medical and biological disciplines. While deterministic models (partial differential equations) of such processes are well established,…

Computational Physics · Physics 2025-10-20 Luke P. Filippini , Adrianne L. Jenner , Elliot J. Carr

A driven diffusive model of three types of particles that exhibits phase separation on a ring is introduced. The dynamics is local and comprises nearest neighbor exchanges that conserve each of the three species. For the case in which the…

Statistical Mechanics · Physics 2009-10-30 M. R. Evans , Y. Kafri , H. M. Koduvely , D. Mukamel

Agglomeration, adsorption, and extraction in dispersed multiphase systems are ubiquitously encountered in biological systems, energy industry, and medical science. In this work, a novel lattice model is extended to the three-component…

Statistical Mechanics · Physics 2022-10-12 Yiran Li , Yunfan Huang , Xukang Lu , Moran Wang

Lattice-based random walk models are widely used to study populations of migrating cells with motility bias and proliferation. Crowding is typically represented by volume exclusion, where each lattice site can be occupied by at most one…

Populations and Evolution · Quantitative Biology 2026-01-28 Michael J. Plank , Matthew J. Simpson

A simple finite element formulation of the outlet gradient boundary condition is presented in the general context of convective-diffusive transport processes. Basically, the method is based on an upstream evaluation of the dependent…

Fluid Dynamics · Physics 2011-11-15 Fabien Cornaton , Pierre Perrochet , Hans-Jörg Diersch

Two influential exact results in classical one-dimensional diffusive transport are about current statistics for the symmetric simple exclusion process: one in the stationary state on a finite line coupled with two unequal reservoirs at the…

Statistical Mechanics · Physics 2026-05-07 Kapil Sharma , Soumyabrata Saha , Sandeep Jangid , Tridib Sadhu

Trajectories of endosomes inside living eukaryotic cells are highly heterogeneous in space and time and diffuse anomalously due to a combination of viscoelasticity, caging, aggregation and active transport. Some of the trajectories display…

Subcellular Processes · Quantitative Biology 2021-07-28 Nickolay Korabel , Daniel Han , Alessandro Taloni , Gianni Pagnini , Sergei Fedotov , Viki Allan , Thomas A. Waigh