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We present a parallel algorithm and scalable implementation for genome analysis, specifically the problem of finding overlaps and alignments for data from "third generation" long read sequencers. While long sequences of DNA offer enormous…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-29 Marquita Ellis , Giulia Guidi , Aydın Buluç , Leonid Oliker , Katherine Yelick

The performance of computer networks relies on how bandwidth is shared among different flows. Fair resource allocation is a challenging problem particularly when the flows evolve over time.To address this issue, bandwidth sharing techniques…

Networking and Internet Architecture · Computer Science 2017-11-28 Zaid Allybokus , Konstantin Avrachenkov , Jérémie Leguay , Lorenzo Maggi

Due to the significant increase in the size of spatial data, it is essential to use distributed parallel processing systems to efficiently analyze spatial data. In this paper, we first study learned spatial data partitioning, which…

Databases · Computer Science 2023-06-21 Keizo Hori , Yuya Sasaki , Daichi Amagata , Yuki Murosaki , Makoto Onizuka

In this paper, we focus on the problem of data sharing over a wireless computer network (i.e., a wireless grid). Given a set of available data, we present a distributed algorithm which operates over a dynamically changing network, and…

Systems and Control · Electrical Eng. & Systems 2022-07-19 Apostolos I. Rikos , Christoforos N. Hadjicostis , Karl H. Johansson

Deep learning architectures are showing great promise in various computer vision domains including image classification, object detection, event detection and action recognition. In this study, we investigate various aspects of…

Computer Vision and Pattern Recognition · Computer Science 2016-08-08 Hilal Ergun , Mustafa Sert

We apply a deep convolutional neural network segmentation model to enable novel automated microstructure segmentation applications for complex microstructures typically evaluated manually and subjectively. We explore two microstructure…

Computer Vision and Pattern Recognition · Computer Science 2019-02-06 Brian L. DeCost , Bo Lei , Toby Francis , Elizabeth A. Holm

Distributed systems often serve dynamic workloads and resource demands evolve over time. Such a temporal behavior stands in contrast to the static and demand-oblivious nature of most data structures used by these systems. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-19 Arash Pourdamghani , Chen Avin , Robert Sama , Maryam Shiran , Stefan Schmid

Modern machine learning algorithms are increasingly computationally demanding, requiring specialized hardware and distributed computation to achieve high performance in a reasonable time frame. Many hyperparameter search algorithms have…

Machine Learning · Computer Science 2018-07-16 Richard Liaw , Eric Liang , Robert Nishihara , Philipp Moritz , Joseph E. Gonzalez , Ion Stoica

Structured pruning is an effective approach for compressing large pre-trained neural networks without significantly affecting their performance. However, most current structured pruning methods do not provide any performance guarantees, and…

Machine Learning · Computer Science 2023-02-14 Marwa El Halabi , Suraj Srinivas , Simon Lacoste-Julien

A well-designed fine-grained categorization system usually has three contradictory requirements: accuracy (the ability to identify objects among subordinate categories); interpretability (the ability to provide human-understandable…

Computer Vision and Pattern Recognition · Computer Science 2016-10-05 Shaoli Huang , Dacheng Tao

Outsourcing data storage to the remote cloud can be an economical solution to enhance data management in the smart grid ecosystem. To protect the privacy of data, the utility company may choose to encrypt the data before uploading them to…

Cryptography and Security · Computer Science 2018-11-01 Jiangnan Li , Xiangyu Niu , Jinyuan Stella Sun

Network analysis has played a key role in knowledge discovery and data mining. In many real-world applications in recent years, we are interested in mining multilayer networks, where we have a number of edge sets called layers, which encode…

Social and Information Networks · Computer Science 2022-11-08 Yasushi Kawase , Atsushi Miyauchi , Hanna Sumita

Coherent photonic computing uses both the phase and amplitude of light to implement linear operations such as dot products and matrix multiplication but requires phase stability between the interfering paths. This poses a challenge for such…

Optics · Physics 2026-04-16 Shenghan Gao , Kathy Lüdge , Francesco Da Ros , Nathan Youngblood

We address the problem of managing historical data for large evolving information networks like social networks or citation networks, with the goal to enable temporal and evolutionary queries and analysis. We present the design and…

Databases · Computer Science 2012-07-25 Udayan Khurana , Amol Deshpande

Distributed deep neural networks (DNNs) have become central to modern computer vision, yet their deployment on resource-constrained edge devices remains hindered by substantial parameter counts, computational demands, and the probability of…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-17 Mahadev Sunil Kumar , Arnab Raha , Debayan Das , Gopakumar G , Rounak Chatterjee , Amitava Mukherjee

Semisort is a fundamental algorithmic primitive widely used in the design and analysis of efficient parallel algorithms. It takes input as an array of records and a function extracting a \emph{key} per record, and reorders them so that…

Data Structures and Algorithms · Computer Science 2023-04-21 Xiaojun Dong , Yunshu Wu , Zhongqi Wang , Laxman Dhulipala , Yan Gu , Yihan Sun

We introduce a neighborhood-based data access model for distributed coded storage allocation. Storage nodes are connected in a generic network and data is accessed locally: a user accesses a randomly chosen storage node, which subsequently…

Information Theory · Computer Science 2014-11-12 Dusan Jakovetic , Aleksandar Minja , Dragana Bajovic , Dejan Vukobratovic

We present an approach for efficiently taking snapshots of the state of a collection of CAS objects. Taking a snapshot allows later operations to read the value that each CAS object had at the time the snapshot was taken. Taking a snapshot…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-01 Yuanhao Wei , Naama Ben-David , Guy E. Blelloch , Panagiota Fatourou , Eric Ruppert , Yihan Sun

Astrophysics has become a domain extremely rich of scientific data. Data mining tools are needed for information extraction from such large datasets. This asks for an approach to data management emphasizing the efficiency and simplicity of…

Databases · Computer Science 2009-11-10 M. Frailis , A. De Angelis , V. Roberto

Subgraph counting aims to count the occurrences of a subgraph template T in a given network G. The basic problem of computing structural properties such as counting triangles and other subgraphs has found applications in diverse domains.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-12 Langshi Chen , Jiayu Li , Ariful Azad , Lei Jiang , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu
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