Related papers: How to compute the atomic stress objectively?
We present a velocity-based moving mesh virtual element method for the numerical solution of PDEs involving moving boundaries. The virtual element method is used for computing both the mesh velocity and a conservative Arbitrary…
We explore alternative writings of the equations of classical elastodynamics as a first order symmetric system. In the one dimensional case we present symmetric writings with respect to: i) the velocity ($u_t$) and the displacement gradient…
The aim of this paper is to analyze a mixed formulation for the two dimensional Stokes eigenvalue problem where the unknowns are the stress and the velocity, whereas the pressure can be recovered with a simple postprocess of the stress. The…
Stretching in continuum mechanics is naturally described using the Cauchy-Green strain tensors. These tensors quantify the Lagrangian stretching experienced by a material element, and provide a powerful way to study processes in turbulent…
An arbitrary Lagrangian--Eulerian finite element method and numerical implementation for curved and deforming lipid membranes is presented here. The membrane surface is endowed with a mesh whose in-plane motion need not depend on the…
The principle of stationary action is a cornerstone of modern physics, providing a powerful framework for investigating dynamical systems found in classical mechanics through to quantum field theory. However, computational neuroscience,…
We present an Eulerian vortex method based on the theory of flow maps to simulate the complex vortical motions of incompressible fluids. Central to our method is the novel incorporation of the flow-map transport equations for line elements,…
In this paper, we investigate the hemodynamics of a left atrium (LA) by proposing a computational model suitable to provide physically meaningful fluid dynamics indications and detailed blood flow characterization. In particular, we…
Exact solutions are found for Euler's equations of rigid body motion for general asymmetrical bodies under the influence of torque by using Jacobi elliptic functions. Differential equations are determined for the amplitudes and the…
The motion of a particle carried by a liquid is described by the differential equation equating the velocity of the particle at time t to the the Eulerian velocity field at time t and at the location of the particle at that time. Assuming…
A variant of the usual Lagrangian scheme is developed which describes both the equations of motion and the variational equations of a system. The required (prolonged) Lagrangian is defined in an extended configuration space comprising both…
A force-based optimization method is proposed to apply the first and second kind of Piola-Kirchhoff stresses in molecular statics simulation. This method is important for finite deformation problems in which the atomistic behavior can be…
We study the interior H\"older regularity problem for weak solutions of the porous medium equation with external forces. Since the porous medium equation is the typical example of degenerate parabolic equations, H\"older regularity is a…
Ewald summation and physically equivalent methods such as particle-mesh Ewald, kubic-harmonic expansions, or Lekner sums are commonly used to calculate long-range electrostatic interactions in computer simulations of polar and charged…
We prove that the stress tensor, tau^{ab}, of a molecular system with arbitrary, short-range interactions can be point-wisely expressed as the functional derivative of the partition function with respect to the local deformation tensor. In…
We use a perturbative approach to evaluate transition amplitudes corresponding to quantum friction, for a scalar model describing an atom which moves at a constant velocity, close to a material plane. In particular, we present results on…
Both orbital and rotational dynamics employ the method of variation of parameters. We express, in a non-perturbed setting, the coordinates (Cartesian, in the orbital case, or Eulerian in the rotation case) via the time and six adjustable…
An elegant quaternionic formulation is given for the Lagrangian advection equation for velocity vector potential in fluid dynamics. At first we study the topological significance of a restricted conserved quantity viz., stream-helicity and…
For linearized Navier-Stokes equations, we first derive a Carleman estimate with a regular weight function. Then we apply it to establish conditional stability for the lateral Cauchy problem and finally we prove conditional stability…
The Shuttleworth equation: a linear stress-strain relation ubiquitously used in modeling the behavior of soft surfaces. Its validity in the realm of materials subject to large deformation is a topic of current debate. Here, we allow for…