English
Related papers

Related papers: Motional Coherence in Fluid Phospholipid Membranes

200 papers

Translational motion of neurotransmitter receptors is key for determining receptor number at the synapse and hence, synaptic efficacy. We combine live-cell STORM superresolution microscopy of nicotinic acetylcholine receptor (nAChR) with…

Biological Physics · Physics 2018-09-07 Alejo Mosqueira , Pablo A. Camino , Francisco J. Barrantes

In spite of the great success that all-atom molecular dynamics simulations have seen in revealing the nature of the lipid bilayer, the interplay between a membrane's curvature and dynamics remains elusive. This is largely due to the…

Soft Condensed Matter · Physics 2022-07-26 Christopher Kang , Kazuumi Fujioka , Rui Sun

We study the dynamics of hydration water/protein association in folded proteins, using lysozyme and myoglobin as examples. Extensive molecular dynamics simulations are performed to identify underlying mechanisms of the dynamical transition…

Soft Condensed Matter · Physics 2015-05-13 J. Servantie , C. Atilgan , A. R. Atilgan

We investigate the mechanical properties of bilayers of 1,2-dipalmitoyl-sn-glycero-3-phosphocholine in the gel phase by using peak force tapping with quantitative nanomechanical mapping. We study both dry and aqueous bilayers and liposomes…

Soft Condensed Matter · Physics 2021-02-04 Luca Quaroni , Kingshuk Bandopadhyay , Marzena Mach , Paweł Wydro , Szczepan Zapotoczny

We introduce a microscopic model of a lipid with a charged headgroup and flexible hydrophobic tails, a neutral solvent, and counter ions. Short-ranged interactions between hydrophilic and hydrophobic moieties are included as are the Coulomb…

Soft Condensed Matter · Physics 2009-10-31 Xiao-jun Li , M. Schick

Understanding interactions between membranes requires measurements on well-controlled systems close to natural conditions, in which fluctuations play an important role. We have determined, by grazing incidence X-ray scattering, the…

Despite much effort to probe the properties of dimethyl sulfoxide (DMSO) solution, effects of DMSO on water, especially near plasma membrane surfaces still remain elusive. By performing molecular dynamics (MD) simulations at varying DMSO…

Soft Condensed Matter · Physics 2017-02-01 Yuno Lee , Philip A. Pincus , Changbong Hyeon

We present a ``coarse molecular dynamics'' approach and apply it to studying the kinetics and thermodynamics of a peptide fragment dissolved in water. Short bursts of appropriately initialized simulations are used to infer the deterministic…

Chemical Physics · Physics 2009-11-07 Gerhard Hummer , Ioannis G. Kevrekidis

Atomistic simulations were performed on hydrated model lipid multilayers that are representative of the lipid matrix in the outer skin (stratum corneum). We find that cholesterol transfers easily between adjacent leaflets belonging to the…

Soft Condensed Matter · Physics 2014-10-27 Chinmay Das , Massimo G. Noro , Peter D. Olmsted

We have calculated the electron density maps of the ripple phase of dimyristoylphosphatidylcholine (DMPC) and palmitoyl-oleoyl phosphatidylcholine (POPC) multibilayers at different temperatures and fixed relative humidity. Our analysis…

Soft Condensed Matter · Physics 2009-10-31 Kheya Sengupta , V. A. Raghunathan , John Katsaras

The relaxation dynamics in two van der Waals bonded and one hydrogen-bonding molecular liquids is studied as a function of pressure and temperature by incoherent neutron scattering using simultaneous dielectric spectroscopy. The dynamics is…

Soft Condensed Matter · Physics 2018-09-10 Henriette Wase Hansen , Bernhard Frick , Simone Capaccioli , Alejandro Sanz , Kristine Niss

Free volume pockets or voids are important to many biological processes in cell membranes. Free volume fluctuations are a prerequisite for diffusion of lipids and other macromolecules in lipid bilayers. Permeation of small solutes across a…

Soft Condensed Matter · Physics 2009-11-10 Emma Falck , Michael Patra , Mikko Karttunen , Marja T. Hyvonen , Ilpo Vattulainen

Lipid membranes form the barrier between the inside and outside of cells and many of their subcompartments. As such, they bind to a wide variety of nano- and micrometer sized objects and, in the presence of strong adhesive forces, strongly…

Soft Condensed Matter · Physics 2021-08-31 Hendrik T. Spanke , Jaime Agudo-Canalejo , Daniel Tran , Robert W. Style , Eric R. Dufresne

We study lipid translocation ("flip-flop") between the leaflets of a planar lipid bilayer with transition path sampling (TPS). Rare flip-flops compete with biological machineries that actively establish asymmetric lipid compositions.…

Soft Condensed Matter · Physics 2025-02-18 Matthias Post , Gerhard Hummer

Engineering the synthetic nanopores through lipid bilayer membrane to access the interior of a cell is a long persisting challenge in biotechnology. Here, we demonstrate the stability and dynamics of a tile-based 6-helix DNA nanotube (DNT)…

Soft Condensed Matter · Physics 2017-10-18 Himanshu Joshi , Prabal K. Maiti

We investigated the molecular dynamics of the prototypical deep eutectic solvent (DES) ethaline. We disentangled the different motions of its two constituents, namely choline chloride and ethylene glycol on a spatio-temporal range that…

Biomembranes consisting of two opposing phospholipid monolayers, which comprise the so-called lipid bilayer, are largely responsible for the dual solid-fluid behavior of individual cells and viruses. Quantifying the mechanical…

Biological Physics · Physics 2024-05-27 Naoki Takeishi , Masaya Santo , Naoto Yokoyama , Shigeo Wada

We have investigated the dynamics of liquid water confined in mesostructured porous silica (MCM-41) and periodic mesoporous organosilicas (PMOs) by incoherent quasielastic neutron scattering experiments. The effect of tuning the…

During this experiment we were testing the hypothesis that standing waves in a phospholipid membrane stack indeed lead to a detectable signal in coherent grazing-incidence small-angle neutron scattering, GISANS. These modes were identified…

We present neutron scattering measurements on the dynamics of hemoglobin (Hb) in human red blood cells in vivo. Global and internal Hb dynamics were measured in the ps to ns time- and {\AA} length-scale using quasielastic neutron…

Biological Physics · Physics 2011-04-11 Andreas Maximilian Stadler , Lambert van Eijck , Franz Demmel , Gerhard Artmann
‹ Prev 1 4 5 6 7 8 10 Next ›