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The equations of motion in a macroscopically inhomogeneous porous medium saturated by a fluid are derived. As a first verification of the validity of these equations, a two-layer rigid frame porous system considered as one single porous…

Engineering simple, artificial models of living cells allows synthetic biologists to study cellular functions under well-controlled conditions. Reconstituting multicellular behaviors with synthetic cell-mimics is still a challenge because…

Biomolecules · Quantitative Biology 2021-04-29 Imre Banlaki , Francois-Xavier Lehr , Henrike Niederholtmeyer

The derivation of suitable analytical models is an important step for the design and analysis of molecular communication systems. However, many existing models have limited applicability in practical scenarios due to various simplifications…

Emerging Technologies · Computer Science 2019-11-28 Maximilian Schäfer , Wayan Wicke , Werner Haselmayr , Rudolf Rabenstein , Robert Schober

The problem of diffusion in a porous medium with a spatially varying porosity is considered. The particular microstructure analyzed comprises a collection of impenetrable spheres, though the methods developed are general. Two different…

Fluid Dynamics · Physics 2017-10-12 Maria Bruna , S. Jonathan Chapman

This work uncovers the low-dimensional nature the complex dynamics of actuated separated flows. Namely, motivated by the problem of model-based predictive control of separated flows, we identify the requirements on a model-based observer…

Fluid Dynamics · Physics 2007-10-10 R. Krechetnikov , J. E. Marsden , H. M. Nagib

This paper presents a simple tool for characterising the timescale for continuum diffusion processes through layered heterogeneous media. This mathematical problem is motivated by several practical applications such as heat transport in…

Computational Physics · Physics 2018-04-13 Elliot J. Carr

A mathematical model is developed, to jointly analyze elastic and inelastic scattering data of fluctuating membranes within a single theoretical framework. The model builds on a non-homogeneously clipped time-dependent Gaussian random…

Spatiotemporal disorder has been recently associated to the occurrence of anomalous nonergodic diffusion of molecular components in biological systems, but the underlying microscopic mechanism is still unclear. We introduce a model in which…

Statistical Mechanics · Physics 2017-03-15 C. Charalambous , G. Muñoz-Gil , A. Celi , M. F. Garcia-Parajo , M. Lewenstein , C. Manzo , M. A. García-March

The viscous flow of two immiscible fluids in a porous medium on the Darcy scale is governed by a system of nonlinear parabolic equations. If infinite mobility of one phase can be assumed (e.g. in soil layers in contact with the atmosphere)…

Numerical Analysis · Mathematics 2021-06-29 David Seus , Florin A. Radu , Christian Rohde

Random lateral translocation of lipids and proteins is a universal process on membrane surfaces. Local aggregation or organization of lipids and proteins can be induced when this lateral random diffusion is mediated by the electrostatic…

Quantitative Methods · Quantitative Biology 2015-06-03 Y. C. Zhou

In this paper, we derive an effective model for transport processes in periodically perforated elastic media, taking into account, e.g., cyclic elastic deformations as they occur in lung tissue due to respiratory movement. The underlying…

Analysis of PDEs · Mathematics 2022-06-15 Jonas Knoch , Markus Gahn , Maria Neuss-Radu , Nicolas Neuß

A microscopic bubble of soluble gas always dissolves in finite time in an under-saturated fluid. This diffusive process is driven by the difference between the gas concentration near the bubble, whose value is governed by the internal…

Fluid Dynamics · Physics 2018-03-21 Sébastien Michelin , Etienne Guérin , Eric Lauga

Using Monte Carlo simulations we investigate some new aspects of the phase diagram and the behavior of the diffusion coefficient in an associating lattice gas (ALG) model on different regions of the phase diagram. The ALG model combines a…

Soft Condensed Matter · Physics 2015-05-13 Marcia M. Szortyka , Vera Henriques , Mauricio Girardi , Marcia C. Barbosa

Water molecules play an important role in providing unique environments for biological reactions on cell membranes. It is widely believed that water molecules form bridges that connect lipid molecules and stabilize cell membranes. Using…

Biological Physics · Physics 2014-08-04 Eiji Yamamoto , Takuma Akimoto , Masato Yasui , Kenji Yasuoka

We study the flow of a micropolar fluid in a thin domain with microstructure, i.e. a thin domain with thickness $\varepsilon$ which is perforated by periodically distributed solid cylinders of size $a_\varepsilon$. A main feature of this…

Analysis of PDEs · Mathematics 2025-12-17 Francisco J. Suárez-Grau

The rheology of pressure-driven flows of two-dimensional dense monodisperse emulsions in neutral wetting microchannels is investigated by means of mesoscopic lattice simulations, capable of handling large collections of droplets, in the…

Soft Condensed Matter · Physics 2019-12-03 Linlin Fei , Andrea Scagliarini , Kai H. Luo , Sauro Succi

A mathematical model describing the erosion or leaching of a solid material by a flowing fluid in a column is developed. This involves an advection-diffusion equation coupled to a linear kinetic reaction describing the mass transfer between…

Other Condensed Matter · Physics 2022-04-04 Timothy G. Myers , Abel Valverde , Maria Aguareles , Marc Calvo-Schwarzwalder , Francesc Font

We propose here a model for solidification of a liquid contents of an elastic bottle in a freezer. The main goal is to explain the occurrence of high stresses inside the bottle. As a by-product, we derive a formula for the undercooling…

Analysis of PDEs · Mathematics 2014-01-10 Pavel Krejci , Elisabetta Rocca , Juergen Sprekels

We consider the classical problem of particle diffusion in $d$-dimensional radially-symmetric systems with absorbing boundaries. A key quantity to characterise such diffusive transport is the evolution of the proportion of particles…

Computational Physics · Physics 2022-09-07 Elliot J. Carr

Using analytical calculations and computer simulations we consider both the lateral diffusion of a membrane protein and the fluctuation spectrum of the membrane in which the protein is embedded. The membrane protein interacts with the…

Soft Condensed Matter · Physics 2015-05-18 Ellen Reister-Gottfried , Stefan M. Leitenberger , Udo Seifert