English
Related papers

Related papers: RNA matrix models with external interactions and t…

200 papers

The study of gene regulation and expression is often discussed in quantitative terms. In particular, the expression of genes is regularly characterized with respect to how much, how fast, when and where. Whether discussing the level of gene…

Molecular Networks · Quantitative Biology 2007-05-23 Lacramioara Bintu , Nicolas E. Buchler , Hernan G. Garcia , Ulrich Gerland , Terence Hwa , Jane' Kondev , Rob Phillips

We study the effects of the sequence on the propagation of nonlinear excitations in simple models of DNA, and how those effects are modified by noise. Starting from previous results on soliton dynamics on lattices defined by aperiodic…

Biomolecules · Quantitative Biology 2009-11-10 Sara Cuenda , Angel Sanchez

We study the partition function from random matrix theory using a well known connection to orthogonal polynomials, and a recently developed Riemann-Hilbert approach to the computation of detailed asymptotics for these orthogonal…

Mathematical Physics · Physics 2007-05-23 N. M. Ercolani , K. D. T-R McLaughlin

Although both RNA and proteins have densely packed native structures, chain organizations of these two biopolymers are fundamentally different. Motivated by the recent discoveries in chromatin folding that interphase chromosomes have…

Soft Condensed Matter · Physics 2016-12-28 Lei Liu , Changbong Hyeon

Maps are polygonal cellular networks on Riemann surfaces. This paper analyzes the construction of closed form general representations for the enumerative generating functions associated to maps of fixed but arbitrary genus. The method of…

Mathematical Physics · Physics 2022-05-27 Nicholas M. Ercolani , Patrick Waters

This paper develops a method to carry out the large-$N$ asymptotic analysis of a class of $N$-dimensional integrals arising in the context of the so-called quantum separation of variables method. We push further ideas developed in the…

Mathematical Physics · Physics 2023-07-07 G. Borot , A. Guionnet , K. K. Kozlowski

An invariant ensemble of $N\times N$ random matrices can be characterised by a joint distribution for eigenvalues $P(\lambda_1,\cdots,\lambda_N)$. The study of the distribution of linear statistics, i.e. of quantities of the form…

Statistical Mechanics · Physics 2017-09-25 Aurélien Grabsch , Christophe Texier

This article studies the Gram random matrix model $G=\frac1T\Sigma^{\rm T}\Sigma$, $\Sigma=\sigma(WX)$, classically found in the analysis of random feature maps and random neural networks, where $X=[x_1,\ldots,x_T]\in{\mathbb R}^{p\times…

Probability · Mathematics 2017-06-30 Cosme Louart , Zhenyu Liao , Romain Couillet

We consider properties of determinants of some random symmetric matrices issued from multivariate statistics: Wishart/Laguerre ensemble (sample covariance matrices), Uniform Gram ensemble (sample correlation matrices) and Jacobi ensemble…

Probability · Mathematics 2008-01-30 Alain Rouault

We establish formulae for the asymptotic growth (with respect to the scaling dimension) of the number of operators in effective field theory, or equivalently the number of $S$-matrix elements, in arbitrary spacetime dimensions and with…

High Energy Physics - Theory · Physics 2021-05-19 Tom Melia , Sridip Pal

We define a new large $N$ limit for general $\text{O}(N)^{R}$ or $\text{U}(N)^{R}$ invariant tensor models, based on an enhanced large $N$ scaling of the coupling constants. The resulting large $N$ expansion is organized in terms of a…

High Energy Physics - Theory · Physics 2019-04-23 Frank Ferrari , Vincent Rivasseau , Guillaume Valette

We develop an iterative algorithm for the genus expansion of the hermitian $N\times N$ one-matrix model ( = the Penner model in an external field). By introducing moments of the external field, we prove that the genus $g$ contribution to…

High Energy Physics - Theory · Physics 2009-10-22 J. Ambjorn , L. Chekhov , Yu. Makeenko

Determination of sizes and flexibilities of RNA molecules is important in understanding the nature of packing in folded structures and in elucidating interactions between RNA and DNA or proteins. Using the coordinates of the structures of…

Biomolecules · Quantitative Biology 2009-11-13 Changbong Hyeon , Ruxandra I. Dima , D. Thirumalai

Let $C_{n,g}$ be the number of rooted cubic maps with $2n$ vertices on the orientable surface of genus $g$. We show that the sequence $(C_{n,g}:g\ge 0)$ is asymptotically normal with mean and variance asymptotic to $(1/2)(n-\ln n)$ and…

Combinatorics · Mathematics 2023-07-11 Zhicheng Gao

We discuss the physics of RNA as described by its secondary structure. We examine the static properties of a homogeneous RNA-model that includes pairing and base stacking energies as well as entropic costs for internal loops. For large…

Statistical Mechanics · Physics 2009-11-07 M. Mueller

We consider ensembles of Gaussian (Hermite) and Wishart (Laguerre) $N\times N$ hermitian matrices. We study the effect of finite rank perturbations of these ensembles by a source term. The rank $r$ of the perturbation corresponds to the…

Mathematical Physics · Physics 2007-05-23 Patrick Desrosiers , Peter J. Forrester

We study the growth of matter density perturbations delta_m for a number of viable f(R) gravity models that satisfy both cosmological and local gravity constraints, where the Lagrangian density f is a function of the Ricci scalar R. If the…

Cosmology and Nongalactic Astrophysics · Physics 2009-11-05 Shinji Tsujikawa , Radouane Gannouji , Bruno Moraes , David Polarski

In this article, a model of random hermitian matrices is considered, in which the measure $\exp(-S)$ contains a general U(N)-invariant potential and an external source term: $S=N\tr(V(M)+MA)$. The generalization of known determinant…

Condensed Matter · Physics 2009-10-30 P. Zinn-Justin

The perturbation technique within the framework of the asymptotic iteration method is used to obtain large-order shifted 1/N expansions, where N is the number of spatial dimensions. This method is contrary to the usual…

Quantum Physics · Physics 2007-08-17 T. Barakat

It is shown that the simplest multiplicative random complex matrix model generalizes the large-N phase structure found in the unitary case: A perturbative regime is joined to a nonperturbative regime at a point of nonanalyticity.

High Energy Physics - Lattice · Physics 2010-01-21 Robert Lohmayer , Herbert Neuberger , Tilo Wettig