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The controversy concerning both the definition of the species and methods for inferring the boundaries and numbers of species has occupied biologists for centuries, and the debate itself has become known as the species problem. The modern…

Other Quantitative Biology · Quantitative Biology 2010-04-20 Yan Huang

We employ planetary evolution modeling to reproduce the MR distribution of the 198 so far detected planets with mass and radius measured to the <45% and <15% level, respectively, and less massive than 108Me. We simultaneously account for…

Earth and Planetary Astrophysics · Physics 2022-12-28 Daria Kubyshkina , Luca Fossati

Many animal groups are heterogeneous and may even consist of individuals of different species, called mixed-species flocks. Mathematical and computational models of collective animal movement behaviour, however, typically assume that groups…

Adaptation and Self-Organizing Systems · Physics 2019-03-27 Gokul G. Nair , Athmanathan Senthilnathan , Srikanth K. Iyer , Vishwesha Guttal

The biological theory of adaptive dynamics proposes a description of the long-term evolution of a structured asexual population. It is based on the assumptions of large population, rare mutations and small mutation steps, that lead to a…

Probability · Mathematics 2007-05-23 Nicolas Champagnat , Amaury Lambert

We discuss the population dynamics with selection and random diffusion, keeping the total population constant, in a fitness landscape associated with Constraint Satisfaction, a paradigm for difficult optimization problems. We obtain a phase…

Populations and Evolution · Quantitative Biology 2016-11-23 Tommaso Brotto , Guy Bunin , Jorge Kurchan

We study the high temperature phase of a family of typed branching diffusions initially studied in [Ast\'{e}risque 236 (1996) 133--154] and [Lecture Notes in Math. 1729 (2000) 239--256 Springer, Berlin]. The primary aim is to establish some…

Probability · Mathematics 2007-05-23 Y. Git , J. W. Harris , S. C. Harris

We consider a critical branching particle system in $\R^d$, composed of individuals of a finite number of types $i\in\{1,...,K\}$. Each individual of type $i$ moves independently according to a symmetric $\alpha_i$-stable motion. We assume…

Probability · Mathematics 2011-07-04 Peter Kevei , Jose Alfredo Lopez Mimbela

Stochastic modeling of phylogenies raises five questions that have received varying levels of attention from quantitatively inclined biologists. 1) How large do we expect (from the model) the ration of maximum historical diversity to…

Populations and Evolution · Quantitative Biology 2013-02-07 Lea Popovic , Maxim Krikun , David Aldous

As a result of climate change, many populations have to modify their range to follow the suitable areas - their "climate envelope" - often risking extinction. During this migration process, they may face absolute boundaries to dispersal,…

Analysis of PDEs · Mathematics 2009-07-07 Lionel Roques , Alain Roques , Henri Berestycki , André Kretzschmar

Ecologists have long investigated how demographic and movement parameters determine the spatial distribution and critical habitat size of a population. However, most models oversimplify movement behavior, neglecting how landscape…

Populations and Evolution · Quantitative Biology 2024-03-11 Vivian Dornelas , Pablo de Castro , Justin M. Calabrese , William F. Fagan , Ricardo Martinez-Garcia

We consider a stochastic version of the basic predator-prey differential equation model. The model, which contains a parameter \omega which represents the number of individuals for one unit of prey -- If x denotes the quantity of prey in…

Dynamical Systems · Mathematics 2011-11-29 Fabien Campillo , Claude Lobry

An ongoing debate in evolutionary biology is whether phenotypic change occurs predominantly around the time of speciation or whether it instead accumulates gradually over time. In this work I propose a general framework incorporating both…

Populations and Evolution · Quantitative Biology 2014-07-02 Krzysztof Bartoszek

The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

Populations and Evolution · Quantitative Biology 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

We consider systems of interacting diffusions with local population regulation. Our main result shows that the total mass process of such a system is bounded above by the total mass process of a tree of excursions with appropriate drift and…

Probability · Mathematics 2013-10-02 Martin Hutzenthaler

Time evolution of number of species (genera, families, and others), population of them, and size distribution of present ones and life times are studied in terms of a new model, where population of each genetic taxon increases by a (random)…

Populations and Evolution · Quantitative Biology 2007-05-23 Caglar Tuncay

We consider the stationary problem for a diffusive logistic equation with the homogeneous Dirichlet boundary condition. Concerning the corresponding Neumann problem, Wei-Ming Ni proposed a question as follows: Maximizing the ratio of the…

Analysis of PDEs · Mathematics 2022-06-10 Jumpei Inoue

This article is concerned with a version of the contact process with sexual reproduction on a graph with two levels of interactions modeling metapopulations. The population is spatially distributed into patches and offspring are produced in…

Probability · Mathematics 2015-04-08 Eric Foxall , Nicolas Lanchier

Assume that $N_m(x)$ denotes the density of the population at a point $x$ at the beginning of the reproductive season in the $m$th year. We study the following impulsive reaction-diffusion model for any $m\in \mathbb Z^+$…

Analysis of PDEs · Mathematics 2016-11-18 Mostafa Fazly , Mark Lewis , Hao Wang

Growth (and resorption) of biological tissue is formulated in the continuum setting. The treatment is macroscopic, rather than cellular or sub-cellular. Certain assumptions that are central to classical continuum mechanics are revisited,…

Quantitative Methods · Quantitative Biology 2015-06-26 K. Garikipati , E. M. Arruda , K. Grosh , H. Narayanan , S. Calve

Phylogenetic diversity is a measure for describing how much of an evolutionary tree is spanned by a subset of species. If one applies this to the (unknown) subset of current species that will still be present at some future time, then this…

Subcellular Processes · Quantitative Biology 2009-09-29 Beata Faller , Fabio Pardi , Mike Steel