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We present an explicit unified stochastic model of fluctuations in population size due to random birth, death, density-dependent competition and environmental fluctuations. Stochastic dynamics provide insight into small populations,…

Populations and Evolution · Quantitative Biology 2008-07-31 Alexei J. Drummond , Peter D. Drummond

In recent years non-demographic variability has been shown to greatly affect dynamics of stochastic populations. For example, non-demographic noise in the form of a bursty reproduction process with an a-priori unknown burst size, or…

Populations and Evolution · Quantitative Biology 2018-06-13 Ohad Vilk , Michael Assaf

We investigate how a catastrophic event (modeled as a temporary fall of the reproduction rate) increases the extinction probability of an isolated self-regulated stochastic population. Using a variant of the Verhulst logistic model as an…

Populations and Evolution · Quantitative Biology 2014-08-06 Michael Assaf , Alex Kamenev , Baruch Meerson

Extinction of a long-lived isolated stochastic population can be described as an exponentially slow decay of quasi-stationary probability distribution of the population size. We address extinction of a population in a two-population system…

Statistical Mechanics · Physics 2015-05-14 Michael Khasin , Baruch Meerson , Pavel V. Sasorov

Environmental noise can cause an exponential reduction in the mean time to extinction (MTE) of an isolated population. We study this effect on an example of a stochastic birth-death process with rates modulated by a colored Gaussian noise.…

Populations and Evolution · Quantitative Biology 2015-05-13 Alex Kamenev , Baruch Meerson , Boris Shklovskii

This paper deals with extinction of an isolated population caused by intrinsic noise. We model the population dynamics in a "refuge" as a Markov process which involves births and deaths on discrete lattice sites and random migrations…

Statistical Mechanics · Physics 2015-05-19 Baruch Meerson , Pavel V. Sasorov

Understanding the mechanisms governing population extinctions is of key importance to many problems in ecology and evolution. Stochastic factors are known to play a central role in extinction, but the interactions between a population's…

Populations and Evolution · Quantitative Biology 2017-11-22 Christopher Spalding , Charles R. Doering , Glenn R. Flierl

Sexually reproducing populations with small number of individuals may go extinct by stochastic fluctuations in sex determination, causing all their members to become male or female in a generation. In this work we calculate the time to…

Populations and Evolution · Quantitative Biology 2012-10-24 David M. Schneider , Eduardo do Carmo , Yaneer Bar-Yam , Marcus A. M. de Aguiar

Theoretical ecologists have long sought to understand how the persistence of populations depends on biotic and abiotic factors. Classical work showed that demographic stochasticity causes the mean time to extinction to increase…

Populations and Evolution · Quantitative Biology 2014-08-06 Otso Ovaskainen , Baruch Meerson

Established populations often exhibit oscillations in their sizes. If a population is isolated, intrinsic stochasticity of elemental processes can ultimately bring it to extinction. Here we study extinction of oscillating populations in a…

Statistical Mechanics · Physics 2016-03-23 Naftali R. Smith , Baruch Meerson

We consider optimal vaccination protocol where the vaccine is in short supply. In this case, disease extinction results from a large and rare fluctuation. We show that the probability of such fluctuation can be exponentially increased by…

Populations and Evolution · Quantitative Biology 2013-05-29 M. Khasin , M. I. Dykman , B. Meerson

We study inhomogeneous host-pathogen dynamics to model the global amphibian population extinction in a lake basin system. The lake basin system is modeled as quenched disorder. In this model we show that once the pathogen arrives at the…

Populations and Evolution · Quantitative Biology 2015-02-03 Trilochan Bagarti

Populations are often subject to catastrophes that cause mass removal of individuals. Many stochastic growth models have been considered to explain such dynamics. Among the results reported, it has been considered whether dispersion…

Probability · Mathematics 2023-08-21 F. Duque , V. V. Junior , F. P. Machado , A. Roldan-Correa

The question of whether a population will persist or go extinct is of key interest throughout ecology and biology. Various mathematical techniques allow us to generate knowledge regarding individual behaviour, which can be analysed to…

Populations and Evolution · Quantitative Biology 2021-04-28 Stuart T. Johnston , Matthew J. Simpson , Edmund J. Crampin

We develop a theory of first passage processes in stochastic non-equilibrium systems of birth-death type using two closely related epidemiological models as examples. Our method employs the probability generating function technique in…

Statistical Mechanics · Physics 2014-08-06 Alex Kamenev , Baruch Meerson

Models of population growth and extinction are an increasingly popular subject of study. However, consequences of stochasticity and noise in shaping distributions and outcomes are not sufficiently explored. Here we consider a distributed…

Statistical Mechanics · Physics 2020-11-11 Bertrand Ottino-Löffler , Mehran Kardar

Methods for predicting the probability and timing of a species' extinction are typically based on a combination of theoretical models and empirical data, and focus on single species population dynamics. Of course, species also interact with…

Populations and Evolution · Quantitative Biology 2012-06-11 Gian Marco Palamara , Gustav W. Delius , Matthew J. Smith , Owen L. Petchey

The extinction of a single species due to demographic stochasticity is analyzed. The discrete nature of the individual agents and the Poissonian noise related to the birth-death processes result in local extinction of a metastable…

Populations and Evolution · Quantitative Biology 2009-11-13 David A. Kessler , Nadav M. Shnerb

We study the non-equilibrium phase transition between survival and extinction of spatially extended biological populations using an agent-based model. We especially focus on the effects of global temporal fluctuations of the environmental…

Statistical Mechanics · Physics 2017-07-04 Hatem Barghathi , Skye Tackkett , Thomas Vojta

We consider a stochastic population model where the intrinsic or demographic noise causes cycling between states before the population eventually goes extinct. A master equation approach coupled with a WKB (Wentzel-Kramers-Brillouin)…

Populations and Evolution · Quantitative Biology 2014-12-16 Garrett Nieddu , Lora Billings , Eric Forgoston
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