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In this Master's thesis, the graph properties of a multi-level drug-protein network are studied, as well as how the network's shape has informed discoveries over the years, identifying primarily crawling discoveries and a smaller number of…

Molecular Networks · Quantitative Biology 2026-03-02 Felipe Bivort Haiek

Bidimensionality is the most common technique to design subexponential-time parameterized algorithms on special classes of graphs, particularly planar graphs. The core engine behind it is a combinatorial lemma of Robertson, Seymour and…

Data Structures and Algorithms · Computer Science 2019-03-05 Fedor V. Fomin , Daniel Lokshtanov , Fahad Panolan , Saket Saurabh , Meirav Zehavi

Causal inference (CI) in observational studies has received a lot of attention in healthcare, education, ad attribution, policy evaluation, etc. Confounding is a typical hazard, where the context affects both, the treatment assignment and…

Methodology · Statistics 2021-08-17 Ankit Sharma , Garima Gupta , Ranjitha Prasad , Arnab Chatterjee , Lovekesh Vig , Gautam Shroff

Index modulation (IM) reduces the power consumption and hardware cost of the multiple-input multiple-output (MIMO) system by activating part of the antennas for data transmission. However, IM significantly increases the complexity of the…

Information Theory · Computer Science 2021-12-03 Chenwu Zhang , Hancheng Lu , Jinxue Liu

Networks are ubiquitous structure that describes complex relationships between different entities in the real world. As a critical component of prediction task over nodes in networks, learning the feature representation of nodes has become…

Machine Learning · Computer Science 2018-09-10 Hansheng Xue , Jiajie Peng , Xuequn Shang

Understanding the learning dynamics of neural networks is one of the key issues for the improvement of optimization algorithms as well as for the theoretical comprehension of why deep neural nets work so well today. In this paper, we…

Machine Learning · Statistics 2021-03-18 Zhenyu Liao , Romain Couillet

Data-driven analysis of complex networks has been in the focus of research for decades. An important area of research is to study how well real networks can be described with a small selection of metrics, furthermore how well network models…

Social and Information Networks · Computer Science 2022-04-28 Marcell Nagy , Roland Molontay

Given an undirected planar graph G with n vertices and a set S of n points inside a simple polygon P, a point-set embedding of G on S is a planar drawing of G such that each vertex is mapped to a distinct point of S and the edges are…

Computational Geometry · Computer Science 2013-10-22 Fatemeh Rajabi-Alni , Alireza Bagheri

This paper presents a framework based on matrices of monoids for the study of coupled cell networks. We formally prove within the proposed framework, that the set of results about invariant synchrony patterns for unweighted networks also…

Multiagent Systems · Computer Science 2022-01-13 Pedro M. Sequeira , António P. Aguiar , João Hespanha

In this paper we provide two recognition algorithms for the class of signed-graphic matroids along with necessary and sufficient conditions for a matroid to be signed-graphic. Specifically, we provide a polynomial-time algorithm which…

Combinatorics · Mathematics 2012-05-08 Leonidas Pitsoulis , Konstantinos Papalamprou

Intelligence relies on an agent's knowledge of what it does not know. This capability can be assessed based on the quality of joint predictions of labels across multiple inputs. In principle, ensemble-based approaches produce effective…

As a fundamental building block in computer vision, edges can be categorised into four types according to the discontinuity in surface-Reflectance, Illumination, surface-Normal or Depth. While great progress has been made in detecting…

Computer Vision and Pattern Recognition · Computer Science 2021-08-03 Mengyang Pu , Yaping Huang , Qingji Guan , Haibin Ling

Recent years have seen impressive progress in visual recognition on many benchmarks, however, generalization to the real-world in out-of-distribution setting remains a significant challenge. A state-of-the-art method for robust visual…

Computer Vision and Pattern Recognition · Computer Science 2021-11-29 Sebastian Cygert , Andrzej Czyzewski

We study the problem of learning Bayesian network structures from data. Koivisto and Sood (2004) and Koivisto (2006) presented algorithms that can compute the exact marginal posterior probability of a subnetwork, e.g., a single edge, in…

Machine Learning · Computer Science 2012-05-14 Jin Tian , Ru He

The comprehensive characterization of the structure of complex networks is essential to understand the dynamical processes which guide their evolution. The discovery of the scale-free distribution and the small world property of real…

Computational Physics · Physics 2009-11-13 Paulino R. Villas Boas , Francisco A. Rodrigues , Gonzalo Travieso , Luciano da F. Costa

The primary objective of this thesis is to develop novel algorithmic approaches for Graph Representation Learning of static and single-event dynamic networks. In such a direction, we focus on the family of Latent Space Models, and more…

Machine Learning · Computer Science 2025-12-22 Nikolaos Nakis

We introduce I/O-optimal certifying algorithms for bipartite graphs, as well as for the classes of split, threshold, bipartite chain, and trivially perfect graphs. When the input graph is a class member, the certifying algorithm returns a…

Data Structures and Algorithms · Computer Science 2022-10-25 Ulrich Meyer , Hung Tran , Konstantinos Tsakalidis

We propose PiNet, a generalised differentiable attention-based pooling mechanism for utilising graph convolution operations for graph level classification. We demonstrate high sample efficiency and superior performance over other graph…

Machine Learning · Computer Science 2020-08-12 Peter Meltzer , Marcelo Daniel Gutierrez Mallea , Peter J. Bentley

Graph neural networks (GNNs) have found widespread application in modeling graph data across diverse domains. While GNNs excel in scenarios where the testing data shares the distribution of their training counterparts (in distribution, ID),…

Machine Learning · Computer Science 2024-01-15 Luzhi Wang , Dongxiao He , He Zhang , Yixin Liu , Wenjie Wang , Shirui Pan , Di Jin , Tat-Seng Chua

The three-in-a-tree problem is to determine if a simple undirected graph contains an induced subgraph which is a tree connecting three given vertices. Based on a beautiful characterization that is proved in more than twenty pages,…

Data Structures and Algorithms · Computer Science 2022-01-06 Kai-Yuan Lai , Hsueh-I Lu , Mikkel Thorup
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