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Traumatic Brain Injury (TBI) results from an impact or concussion to the head with the injury being specifically characterized through pathological degradation at various biological length scales. Following injury, various mechanical…

Quantitative Methods · Quantitative Biology 2025-11-26 Debabrata Auddya , Shiva Rudraraju

Electrocorticography (ECoG) provides direct measurements of synchronized postsynaptic potentials at the exposed cortical surface. Patterns of signal covariance across ECoG sensors have been associated with diverse cognitive functions and…

Neurons and Cognition · Quantitative Biology 2017-06-20 Richard F. Betzel , John D. Medaglia , Ari E. Kahn , Jonathan Soffer , Daniel R. Schonhaut , Danielle S. Bassett

Parkinson's disease (PD) is caused by the progressive loss of dopaminergic cells in substantia nigra pars compacta (SNc). The root cause of this cell loss in PD is still not decisively elucidated. A recent line of thinking traces the cause…

Neurons and Cognition · Quantitative Biology 2020-04-20 Vignayanandam R. Muddapu , Karthik Vijayakumar , Keerthiga Ramakrishnan , V Srinivasa Chakravarthy

Alzheimer's disease causes severe neurodegeneration in the brain that leads to a certain death. The defining factor is the formation of extracellular senile amyloid plaques in the brain. However, therapeutic approaches to remove them have…

Biomolecules · Quantitative Biology 2011-09-07 Andrei Krokhotin , Antti J. Niemi

Neuronal calcium (Ca2+) signaling represents a molecular trigger for diverse central nervous system adaptations and maladaptions. The altered function of dorsal spinal inhibitory interneurons is strongly implicated in the mechanisms…

Neurons and Cognition · Quantitative Biology 2019-02-19 Anna M. Hagenston , Sara Ben Ayed , Hilmar Bading

There are many blank areas in understanding the brain dynamics and especially how it gives rise to consciousness. Quantum mechanics is believed to be capable of explaining the enigma of conscious experience, however till now there is not…

Quantum Physics · Physics 2007-05-23 Danko D. Georgiev

The hyperdense middle cerebral artery (MCA) dot sign has been reported as an important factor in the diagnosis of acute ischemic stroke due to large vessel occlusion. Interpreting the initial CT brain scan in these patients requires high…

Computer Vision and Pattern Recognition · Computer Science 2019-05-23 Jia You , Philip L. H. Yu , Anderson C. O. Tsang , Eva L. H. Tsui , Pauline P. S. Woo , Gilberto K. K. Leung

The paper proposes a novel approach of survival transformers and extreme gradient boosting models in predicting cognitive deterioration in individuals with mild cognitive impairment (MCI) using metabolomics data in the ADNI cohort. By…

Machine Learning · Computer Science 2024-09-25 Henry Musto , Daniel Stamate , Doina Logofatu , Daniel Stahl

Surgical resection is the primary treatment option for brain tumor patients, but it carries the risk of postoperative cognitive impairments. This study investigates how tumor-induced alterations in presurgical neural dynamics relate to…

Signal Processing · Electrical Eng. & Systems 2026-05-05 Triet M. Tran , Sina Khanmohammadi

Allosteric (long-range) interactions can be surprisingly strong in proteins of biomedical interest. Here we use bioinformatic scaling to connect prior results on nonsteroidal anti-inflammatory drugs to promising new drugs that inhibit…

Quantitative Methods · Quantitative Biology 2016-05-04 J. C. Phillips

Cortical microcircuits are very complex networks, but they are composed of a relatively small number of stereotypical motifs. Hence one strategy for throwing light on the computational function of cortical microcircuits is to analyze…

Neurons and Cognition · Quantitative Biology 2017-05-23 Zeno Jonke , Robert Legenstein , Stefan Habenschuss , Wolfgang Maass

Dynamic excitatory-inhibitory (E-I) balance is a paradigmatic mechanism invoked to explain the irregular low firing activity observed in the cortex. However, we will show that the E-I balance can be at the origin of other regimes observable…

Neurons and Cognition · Quantitative Biology 2023-11-13 Hongjie Bi , Matteo Di Volo , Alessandro Torcini

Intracranial hemorrhage occurs when blood vessels rupture or leak within the brain tissue or elsewhere inside the skull. It can be caused by physical trauma or by various medical conditions and in many cases leads to death. The treatment…

Computer Vision and Pattern Recognition · Computer Science 2021-05-14 Kimmo Kärkkäinen , Shayan Fazeli , Majid Sarrafzadeh

Ischemic stroke, caused by cerebral vessel occlusion, presents substantial challenges in medical imaging due to the variability and subtlety of stroke lesions. Magnetic Resonance Imaging (MRI) plays a crucial role in diagnosing and managing…

Image and Video Processing · Electrical Eng. & Systems 2025-01-07 Ashiqur Rahman , Muhammad E. H. Chowdhury , Md Sharjis Ibne Wadud , Rusab Sarmun , Adam Mushtak , Sohaib Bassam Zoghoul , Israa Al-Hashimi

The brain is composed of complex networks of interacting neurons that express considerable heterogeneity in their physiology and spiking characteristics. How does neural heterogeneity affect macroscopic neural dynamics and how does it…

Neurons and Cognition · Quantitative Biology 2022-06-20 Richard Gast , Sara A. Solla , Ann Kennedy

Chronic subdural hematoma (cSDH) is a common neurological condition characterized by the accumulation of blood between the brain and the dura mater. This accumulation of blood can exert pressure on the brain, potentially leading to fatal…

Image and Video Processing · Electrical Eng. & Systems 2024-03-29 Baris Imre , Elina Thibeau-Sutre , Jorieke Reimer , Kuan Kho , Jelmer M. Wolterink

The organization of the axonal cytoskeleton is a key determinant of the normal function of an axon, which is a long thin projection away from a neuron. Under normal conditions two axonal cytoskeletal polymers microtubules and neurofilaments…

Cell Behavior · Quantitative Biology 2016-02-17 Chuan Xue , Blerta Shtylla , Anthony Brown

Purpose: Multi-expert deep learning training methods to automatically quantify ischemic brain tissue on Non-Contrast CT Materials and Methods: The data set consisted of 260 Non-Contrast CTs from 233 patients of acute ischemic stroke…

Computer Vision and Pattern Recognition · Computer Science 2024-03-26 Sophie Ostmeier , Brian Axelrod , Benjamin Pulli , Benjamin F. J. Verhaaren , Abdelkader Mahammedi , Yongkai Liu , Christian Federau , Greg Zaharchuk , Jeremy J. Heit

The impact of inhibitory and excitatory synapses in delay-coupled Hodgkin--Huxley neurons that are driven by noise is studied. If both synaptic types are used for coupling, appropriately tuned delays in the inhibition feedback induce…

Neurons and Cognition · Quantitative Biology 2012-05-01 Qingyun Wang , Honghui Zhang , Matjaz Perc , Guanrong Chen

Pathologically altered iron levels, detected using iron-sensitive MRI techniques such as quantitative susceptibility mapping (QSM), are observed in neurological disorders such as multiple sclerosis (MS) and may play a crucial role in…

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