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An important goal of self-assembly is to achieve a preprogrammed structure with high fidelity. Here, we control the valence of DNA-functionalized emulsions to make linear and branched model polymers, or `colloidomers'. The distribution of…

Soft Condensed Matter · Physics 2018-10-03 Angus McMullen , Miranda Holmes-Cerfon , Francesco Sciortino , Alexander Y. Grosberg , Jasna Brujic

The past two decades have witnessed significant success in applying columnar storage to data warehousing and analytics. However, the rapid growth of machine learning poses new challenges. This paper presents Bullion, a columnar storage…

Databases · Computer Science 2024-11-20 Gang Liao , Ye Liu , Jianjun Chen , Daniel J. Abadi

For challenging state estimation problems arising in domains like vision and robotics, particle-based representations attractively enable temporal reasoning about multiple posterior modes. Particle smoothers offer the potential for more…

Machine Learning · Computer Science 2025-02-18 Ali Younis , Erik B. Sudderth

The sliding window model of computation captures scenarios in which data is arriving continuously, but only the latest $w$ elements should be used for analysis. The goal is to design algorithms that update the solution efficiently with each…

Data Structures and Algorithms · Computer Science 2020-10-26 Michele Borassi , Alessandro Epasto , Silvio Lattanzi , Sergei Vassilvitskii , Morteza Zadimoghaddam

The Boltzmann model for the random generation of "decomposable" combinatorial structures is a set of techniques that allows for efficient random sampling algorithms for a large class of families of discrete objects. The usual requirement of…

Data Structures and Algorithms · Computer Science 2011-12-23 Philippe Duchon

In order to reduce the computational complexity of large language models, great efforts have been made to to improve the efficiency of transformer models such as linear attention and flash-attention. However, the model size and…

Computation and Language · Computer Science 2026-02-04 Ning Ding , Yehui Tang , Haochen Qin , Zhenli Zhou , Chao Xu , Lin Li , Kai Han , Heng Liao , Yunhe Wang

A number-conserving cellular automaton is a simplified model for a system of interacting particles. This paper contains two related constructions by which one can find all one-dimensional number-conserving cellular automata with one kind of…

Cellular Automata and Lattice Gases · Physics 2023-06-22 Markus Redeker

Particle filters are a class of algorithms that are used for "tracking" or "filtering" in real-time for a wide array of time series models. Despite their comprehensive applicability, particle filters are not always the tool of choice for…

Computation · Statistics 2020-01-29 Taylor R. Brown

This paper introduces a new data structure, log_vector, with the following properties: constant time random access to individual elements; constant time element addition to the end; constant time element removal from the end; constant time…

Data Structures and Algorithms · Computer Science 2012-03-23 Anatolijs Gorbunovs

Filters are fast, small and approximate set membership data structures. They are often used to filter out expensive accesses to a remote set S for negative queries (that is, a query x not in S). Filters have one-sided errors: on a negative…

Data Structures and Algorithms · Computer Science 2021-07-08 David J. Lee , Samuel McCauley , Shikha Singh , Max Stein

Motivation: Illumina DNA sequencing is now the predominant source of raw genomic data, and data volumes are growing rapidly. Bioinformatic analysis pipelines are having trouble keeping pace. A common bottleneck in such pipelines is the…

Genomics · Quantitative Biology 2014-09-09 Gregory G. Faust , Ira M. Hall

Matrix reduction is the standard procedure for computing the persistent homology of a filtered simplicial complex with $m$ simplices. Its output is a particular decomposition of the total boundary matrix, from which the persistence diagrams…

Computational Geometry · Computer Science 2023-10-17 Matthew Piekenbrock , Jose A. Perea

It is believed that there is no efficient classical algorithm to determine the linear structure of Boolean function. We investigate an extension of Simon's period-finding quantum algorithm, and propose an efficient quantum algorithm to…

Quantum Physics · Physics 2016-11-26 Li Yang , Hong-Wei Li

Smart Sort algorithm is a "smart" fusion of heap construction procedures (of Heap sort algorithm) into the conventional "Partition" function (of Quick sort algorithm) resulting in a robust version of Quick sort algorithm. We have also…

Data Structures and Algorithms · Computer Science 2012-04-24 Niraj Kumar Singh , Soubhik Chakraborty

Particle filters are computational techniques for estimating the state of dynamical systems by integrating observational data with model predictions. This work introduces a class of Localized Particle Filters (LPFs) that exploit spatial…

Applications · Statistics 2025-07-10 Dan Crisan , Eliana Fausti

This paper describes a new and purely functional implementation technique of binary heaps. A binary heap is a tree-based data structure that implements priority queue operations (insert, remove, minimum/maximum) and guarantees at worst…

Data Structures and Algorithms · Computer Science 2013-12-18 Vladimir Kostyukov

In Persistent Homology and Topology, filtrations are usually given by introducing an ordered collection of sets or a continuous function from a topological space to $\R^n$. A natural question arises, whether these approaches are equivalent…

General Topology · Mathematics 2013-04-05 Barbara Di Fabio , Patrizio Frosini

Filtering is concerned with the sequential estimation of the state, and uncertainties, of a Markovian system, given noisy observations. It is particularly difficult to achieve accurate filtering in complex dynamical systems, such as those…

Probability · Mathematics 2015-12-14 Wonjung Lee , Andrew Stuart

Real life signals are in general non--stationary and non--linear. The development of methods able to extract their hidden features in a fast and reliable way is of high importance in many research fields. In this work we tackle the problem…

Numerical Analysis · Mathematics 2018-10-26 Antonio Cicone , Haomin Zhou

This work shows that the following problems are equivalent, both in theory and in practice: - median filtering: given an $n$-element vector, compute the sliding window median with window size $k$, - piecewise sorting: given an $n$-element…

Data Structures and Algorithms · Computer Science 2014-06-09 Jukka Suomela