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One approach to estimating a species tree from a collection of gene trees is to first estimate probabilities of clades from the gene trees, and then to construct the species tree from the estimated clade probabilities. While a greedy…

Populations and Evolution · Quantitative Biology 2012-11-14 Elizabeth S. Allman , James H. Degnan , John A. Rhodes

Each natural number can be associated with some tree graph. Namely, a natural number $n$ can be factorized as $$ n = p_1^{\alpha_1}\ldots p_k^{\alpha_k},$$ where $p_i$ are distinct prime numbers. Since $\alpha_i$ are naturals, they can be…

Number Theory · Mathematics 2022-10-13 Vitalii V. Iudelevich

A tree diagram is a tree with positive integral weight on each edge, which is a notion generalized from the Dynkin diagrams of finite-dimensional simple Lie algebras. We introduce two nilpotent Lie algebras and their extended solvable Lie…

Representation Theory · Mathematics 2007-07-02 Xiaoping Xu

We study the problem of decomposing (clustering) a tree with respect to costs attributed to pairs of nodes, so as to minimize the sum of costs for those pairs of nodes that are in the same component (cluster). For the general case and for…

Discrete Mathematics · Computer Science 2017-08-17 Jan-Hendrik Lange , Bjoern Andres

We prove that every simple polygon contains a degree 3 tree encompassing a prescribed set of vertices. We give tight bounds on the minimal number of degree 3 vertices. We apply this result to reprove a result from Bose et al. that every set…

Computational Geometry · Computer Science 2012-11-12 Tillmann Miltzow

Decision trees are widely used for non-linear modeling, as they capture interactions between predictors while producing inherently interpretable models. Despite their popularity, performing inference on the non-linear fit remains largely…

Methodology · Statistics 2026-04-14 Soham Bakshi , Snigdha Panigrahi

In this article, we present a binary tree with vertices given by rational functions $p(x)/q(x)$; the root and functional derivation of children are inspired by continued fractions. We prove some special properties of the tree. For example,…

Dynamical Systems · Mathematics 2025-12-15 Niels Langeveld , David Ralston

We study the complexity and expressive power of conjunctive queries over unranked labeled trees represented using a variety of structure relations such as ``child'', ``descendant'', and ``following'' as well as unary relations for node…

Databases · Computer Science 2007-05-23 Georg Gottlob , Christoph Koch , Klaus U. Schulz

One of the main virtues of trees is to represent formal solutions of various functional equations which can be cast in the form of fixed point problems. Basic examples include differential equations and functional (Lagrange) inversion in…

Combinatorics · Mathematics 2013-02-12 Florent Hivert , Jean-Christophe Novelli , Jean-Yves Thibon

We continue investigating the structure of externally definable sets in NIP theories and preservation of NIP after expanding by new predicates. Most importantly: types over finite sets are uniformly definable; over a model, a family of…

Logic · Mathematics 2012-02-14 Artem Chernikov , Pierre Simon

Inspired by [4] we present a new algorithm for uniformly random generation of ordered trees in which all occuring outdegrees can be specified by a given sequence of numbers. The method can be used for random generation of binary or n-ary…

Discrete Mathematics · Computer Science 2021-12-30 Aleksander Kiryk

Decision trees and systems of decision rules are widely used as classifiers, as a means for knowledge representation, and as algorithms. They are among the most interpretable models for data analysis. The study of the relationships between…

Artificial Intelligence · Computer Science 2023-05-04 Kerven Durdymyradov , Mikhail Moshkov

To any tree on $n$ vertices we associate an $n$-dimensional Lotka-Volterra system with $3n-2$ parameters and, for generic values of the parameters, prove it is superintegrable, i.e. it admits $n-1$ functionally independent integrals. We…

Exactly Solvable and Integrable Systems · Physics 2024-10-30 Peter H. van der Kamp , G. R. W. Quispel , D. I. McLaren

Interpreting three-leaf binary trees or {\em rooted triples} as constraints yields an entailment relation, whereby binary trees satisfying some rooted triples must also thus satisfy others, and thence a closure operator, which is known to…

Data Structures and Algorithms · Computer Science 2018-07-03 Matthew P. Johnson

Trees are partial orderings where every element has a linearly ordered set of smaller elements. We define and study several natural notions of completeness of trees, extending Dedekind completeness of linear orders and Dedekind-MacNeille…

Combinatorics · Mathematics 2023-01-18 Valentin Goranko , Ruaan Kellerman , Alberto Zanardo

In this paper we consider a general way of constructing profinite struc- tures based on a given framework - a countable family of objects and a countable family of recognisers (e.g. formulas). The main theorem states: A subset of a family…

Formal Languages and Automata Theory · Computer Science 2011-11-03 Michał Skrzypczak

Root systems are sets with remarkable symmetries and therefore they appear in many situations in mathematics. Among others, denominator formulae of root systems are very beautiful and mysterious equations which have several meanings from a…

Rings and Algebras · Mathematics 2025-06-17 Hiroki Aoki , Hiraku Kawanoue

Random forests are decision tree ensembles that can be used to solve a variety of machine learning problems. However, as the number of trees and their individual size can be large, their decision making process is often incomprehensible. In…

Artificial Intelligence · Computer Science 2022-11-22 Nico Potyka , Xiang Yin , Francesca Toni

The theory of Hubbard trees provides an effective classification of non-linear post-critically finite polynomial maps from \C to itself. This note will extend this classification to the case of maps from a finite union of copies of \C to…

Dynamical Systems · Mathematics 2009-09-25 Alfredo Poirier

Trees are partial orders in which every element has a linearly ordered set of predecessors. Here we initiate the exploration of the structural theory of trees with the study of different notions of \emph{branching in trees} and of…

Combinatorics · Mathematics 2023-01-18 Valentin Goranko , Ruaan Kellerman , Alberto Zanardo