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We address the selection and evaluation of uncertain segmentation methods in medical imaging and present two case studies: prostate segmentation, illustrating that for minimal annotator variation simple deterministic models can suffice, and…

Computer Vision and Pattern Recognition · Computer Science 2024-07-24 Kilian Zepf , Jes Frellsen , Aasa Feragen

Deep learning models for semantic segmentation are able to learn powerful representations for pixel-wise predictions, but are sensitive to noise at test time and do not guarantee a plausible topology. Image registration models on the other…

Image and Video Processing · Electrical Eng. & Systems 2020-12-22 Matthew Sinclair , Andreas Schuh , Karl Hahn , Kersten Petersen , Ying Bai , James Batten , Michiel Schaap , Ben Glocker

Inter reader variability and cross site domain shift challenge the automatic segmentation of prostate anatomy using T2 weighted MRI images. This study investigates whether transformer models can retain precision amid such heterogeneity. We…

Image and Video Processing · Electrical Eng. & Systems 2026-04-23 Shatha Abudalou , Jung Choi , Yasin Yilmaz , Yoganand Balagurunathan

Segmentation of brain structures in a large dataset of magnetic resonance images (MRI) necessitates automatic segmentation instead of manual tracing. Automatic segmentation methods provide a much-needed alternative to manual segmentation…

Image and Video Processing · Electrical Eng. & Systems 2020-08-11 Mohammad-Parsa Hosseini , Esmaeil Davoodi , Evangelia Bouzos , Kost Elisevich , Hamid Soltanian-Zadeh

Segmentation of nodules in thyroid ultrasound imaging plays a crucial role in the detection and treatment of thyroid cancer. However, owing to the diversity of scanner vendors and imaging protocols in different hospitals, the automatic…

Image and Video Processing · Electrical Eng. & Systems 2024-01-23 Xuewei Li , Yaqiao Zhu , Jie Gao , Xi Wei , Ruixuan Zhang , Yuan Tian , ZhiQiang Liu

Automatically segmenting lesion area in breast ultrasound (BUS) images is a challenging one due to its noise, speckle and artifacts. Edge-map of BUS images also does not help because in most cases the edge-map gives no information…

Image and Video Processing · Electrical Eng. & Systems 2022-12-26 Rasheed Abid , S. Kaisar Alam

Fetal ultrasound screening during pregnancy plays a vital role in the early detection of fetal malformations which have potential long-term health impacts. The level of skill required to diagnose such malformations from live ultrasound…

Automated 3-D breast ultrasound (ABUS) is a newfound system for breast screening that has been proposed as a supplementary modality to mammography for breast cancer detection. While ABUS has better performance in dense breasts, reading ABUS…

Image and Video Processing · Electrical Eng. & Systems 2021-09-30 Hamed Fayyaz , Ehsan Kozegar , Tao Tan , Mohsen Soryani

Segmentation is a crucial task in the medical imaging field and is often an important primary step or even a prerequisite to the analysis of medical volumes. Yet treatments such as surgery complicate the accurate delineation of regions of…

Image and Video Processing · Electrical Eng. & Systems 2024-09-13 Heejong Kim , Leo Milecki , Mina C Moghadam , Fengbei Liu , Minh Nguyen , Eric Qiu , Abhishek Thanki , Mert R Sabuncu

Characterization of breast lesions is an essential prerequisite to detect breast cancer in an early stage. Automatic segmentation makes this categorization method robust by freeing it from subjectivity and human error. Both spectral and…

Computer Vision and Pattern Recognition · Computer Science 2017-03-27 Mohammad Saad Billah , Tahmida Binte Mahmud

Magnetic resonance imaging (MRI) is an increasingly important tool for the diagnosis and treatment of prostate cancer. However, interpretation of MRI suffers from high inter-observer variability across radiologists, thereby contributing to…

Face registration deforms a template mesh to closely fit a 3D face scan, the quality of which commonly degrades in non-skin regions (e.g., hair, beard, accessories), because the optimized template-to-scan distance pulls the template mesh…

Liver segmentation from abdominal CT images is an essential step for liver cancer computer-aided diagnosis and surgical planning. However, both the accuracy and robustness of existing liver segmentation methods cannot meet the requirements…

Image and Video Processing · Electrical Eng. & Systems 2021-07-20 Changfa Shi , Min Xian , Xiancheng Zhou , Haotian Wang , Heng-Da Cheng

Automatic prostate segmentation in transrectal ultrasound (TRUS) images is of essential importance for image-guided prostate interventions and treatment planning. However, developing such automatic solutions remains very challenging due to…

Image and Video Processing · Electrical Eng. & Systems 2024-03-05 Yi Wang , Haoran Dou , Xiaowei Hu , Lei Zhu , Xin Yang , Ming Xu , Jing Qin , Pheng-Ann Heng , Tianfu Wang , Dong Ni

Multi-modal image registration is a challenging problem that is also an important clinical task for many real applications and scenarios. As a first step in analysis, deformable registration among different image modalities is often…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Fengze Liu , Jinzheng Cai , Yuankai Huo , Chi-Tung Cheng , Ashwin Raju , Dakai Jin , Jing Xiao , Alan Yuille , Le Lu , ChienHung Liao , Adam P Harrison

Background: Multiparametric breast MRI data might improve tumor diagnostics, characterization, and treatment planning. Accurate alignment and delineation of images acquired at different field strengths such as 3T and 7T, remain challenging…

Image and Video Processing · Electrical Eng. & Systems 2025-01-24 Muhammad Shahkar Khan , Haider Ali , Laura Villazan Garcia , Noor Badshah , Siegfried Trattnig , Florian Schwarzhans , Ramona Woitek , Olgica Zaric

Brightfield and fluorescent imaging of whole brain sections are funda- mental tools of research in mouse brain study. As sectioning and imaging become more efficient, there is an increasing need to automate the post-processing of sec- tions…

Computer Vision and Pattern Recognition · Computer Science 2018-03-12 Yuncong Chen , David Kleinfeld , Martyn Goulding , Yoav Freund

Accurate segmentation for medical images is important for clinical diagnosis. Existing automatic segmentation methods are mainly based on fully supervised learning and have an extremely high demand for precise annotations, which are very…

Computer Vision and Pattern Recognition · Computer Science 2021-06-10 Yuanpeng Liu , Qinglei Hui , Zhiyi Peng , Shaolin Gong , Dexing Kong

This paper presents a method for automatic segmentation, localization, and identification of vertebrae in arbitrary 3D CT images. Many previous works do not perform the three tasks simultaneously even though requiring a priori knowledge of…

Image and Video Processing · Electrical Eng. & Systems 2020-10-01 Naoto Masuzawa , Yoshiro Kitamura , Keigo Nakamura , Satoshi Iizuka , Edgar Simo-Serra

Medical image registration is a fundamental task in medical image analysis, aiming to establish spatial correspondences between paired images. However, existing unsupervised deformable registration methods rely solely on intensity-based…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Hao Xu , Tengfei Xue , Jianan Fan , Dongnan Liu , Yuqian Chen , Fan Zhang , Carl-Fredrik Westin , Ron Kikinis , Lauren J. O'Donnell , Weidong Cai