English
Related papers

Related papers: Evolving complex networks with conserved clique di…

200 papers

Percolation theory can be used to describe the structural properties of complex networks using the generating function formulation. This mapping assumes that the network is locally tree-like and does not contain short-range loops between…

Physics and Society · Physics 2021-02-03 Peter Mann , V. Anne Smith , John B. O. Mitchell , Simon Dobson

Degree distributions of graph representations for compact urban patterns are scale-dependent. Therefore, the degree statistics alone does not give us the enough information to reach a qualified conclusion on the structure of urban spatial…

Physics and Society · Physics 2007-09-28 D. Volchenkov , Ph. Blanchard

We study a class of growth algorithms for directed graphs that are candidate models for the evolution of genetic regulatory networks. The algorithms involve partial duplication of nodes and their links, together with innovation of new…

Molecular Networks · Quantitative Biology 2007-05-23 D. V. Foster , S. A. Kauffman , J. E. S. Socolar

We develop a new class of random graph models for the statistical estimation of network formation -- subgraph generated models (SUGMs). Various subgraphs -- e.g., links, triangles, cliques, stars -- are generated and their union results in…

Physics and Society · Physics 2024-11-27 Arun G. Chandrasekhar , Matthew O. Jackson

Compound graphs are networks in which vertices can be grouped into larger subsets, with these subsets capable of further grouping, resulting in a nesting that can be many levels deep. In several applications, including biological workflows,…

Human-Computer Interaction · Computer Science 2024-08-09 Chang Han , Justin Lieffers , Clayton Morrison , Katherine E. Isaacs

Complex networks of real-world systems are believed to be controlled by common phenomena, producing structures far from regular or random. These include scale-free degree distributions, small-world structure and assortative mixing by…

Social and Information Networks · Computer Science 2013-05-24 Lovro Šubelj , Marko Bajec

The degree distributions of complex networks are usually considered to be power law. However, it is not the case for a large number of them. We thus propose a new model able to build random growing networks with (almost) any wanted degree…

Social and Information Networks · Computer Science 2020-12-08 Thibaud Trolliet , Frédéric Giroire , Stéphane Pérennes

The parallel computational complexity or depth of growing network models is investigated. The networks considered are generated by preferential attachment rules where the probability of attaching a new node to an existing node is given by a…

Statistical Mechanics · Physics 2009-11-10 Benjamin Machta , Jonthan Machta

We discuss two sampling schemes for selecting random subnets from a network: Random sampling and connectivity dependent sampling, and investigate how the degree distribution of a node in the network is affected by the two types of sampling.…

Statistical Mechanics · Physics 2009-11-11 Michael P. H. Stumpf , Carsten Wiuf

We study random subcube intersection graphs, that is, graphs obtained by selecting a random collection of subcubes of a fixed hypercube $Q_d$ to serve as the vertices of the graph, and setting an edge between a pair of subcubes if their…

Probability · Mathematics 2015-06-04 Victor Falgas-Ravry , Klas Markström

The graph of communities is a network emerging above the level of individual nodes in the hierarchical organisation of a complex system. In this graph the nodes correspond to communities (highly interconnected subgraphs, also called modules…

Statistical Mechanics · Physics 2007-05-23 Peter Pollner , Gergely Palla , Tamas Vicsek

We study graph realization problems from a distributed perspective and we study it in the node capacitated clique (NCC) model of distributed computing, recently introduced for representing peer-to-peer networks. We focus on two central…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-19 John Augustine , Keerti Choudhary , Avi Cohen , David Peleg , Sumathi Sivasubramaniam , Suman Sourav

Graph vertices are often organized into groups that seem to live fairly independently of the rest of the graph, with which they share but a few edges, whereas the relationships between group members are stronger, as shown by the large…

Physics and Society · Physics 2007-12-20 Santo Fortunato , Claudio Castellano

Community structures have been identified in various complex real-world networks, for example, communication, information, internet and shareholder networks. The scaling of community size distribution indicates the heterogeneity in the…

Physics and Society · Physics 2022-07-11 Qing Yao , Bingsheng Chen , Tim S. Evans , Kim Christensen

In recent decades, it has been emphasized that the evolving structure of networks may be shaped by interaction principles that yield sparse graphs with a vertex degree distribution exhibiting an algebraic tail, and other structural traits…

Statistical Mechanics · Physics 2025-07-01 Dario Borrelli

The bigraph theory is a relatively young, yet formally rigorous, mathematical framework encompassing Robin Milner's previous work on process calculi, on the one hand, and provides a generic meta-model for complex systems such as multi-agent…

Discrete Mathematics · Computer Science 2020-02-19 Dominik Grzelak , Barbara Priwitzer , Uwe Aßmann

We organize a table of regular graphs with minimal diameters and minimal mean path lengths, large bisection widths and high degrees of symmetries, obtained by enumerations on supercomputers. These optimal graphs, many of which are newly…

Discrete Mathematics · Computer Science 2019-12-30 Yidan Zhang , Xiaolong Huang , Zhipeng Xu , Yuefan Deng

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

Statistical Mechanics · Physics 2009-02-26 Alicia Miralles , Lichao Chen , Zhongzhi Zhang , Francesc Comellas

We study a planted clique model introduced by Feige where a complete graph of size $c\cdot n$ is planted uniformly at random in an arbitrary $n$-vertex graph. We give a simple deterministic algorithm that, in almost linear time, recovers a…

Computational Complexity · Computer Science 2025-05-13 Francesco Agrimonti , Marco Bressan , Tommaso d'Orsi

Randomising networks using a naive `accept-all' edge-swap algorithm is generally biased. Building on recent results for nondirected graphs, we construct an ergodic detailed balance Markov chain with non-trivial acceptance probabilities for…

Quantitative Methods · Quantitative Biology 2011-12-21 E. S. Roberts , A. C. C. Coolen