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The fields of neural computation and artificial neural networks have developed much in the last decades. Most of the works in these fields focus on implementing and/or learning discrete functions or behavior. However, technical, physical,…

Neural and Evolutionary Computing · Computer Science 2016-06-15 Frieder Stolzenburg , Florian Ruh

Modularity is a very widely used measure of the level of clustering or community structure in networks. Here we consider a recent generalisation of the definition of modularity to temporal graphs, whose edge-sets change over discrete…

Combinatorics · Mathematics 2025-07-24 Vilhelm Agdur , Jessica Enright , Laura Larios-Jones , Kitty Meeks , Fiona Skerman , Ella Yates

We apply an information theoretic treatment of action potential time series measured with microelectrode arrays to estimate the connectivity of mammalian neuronal cell assemblies grown {\it in vitro}. We infer connectivity between two…

Neurons and Cognition · Quantitative Biology 2007-05-23 Luis M. A. Bettencourt , Greg J. Stephens , Michael I. Ham , Guenter W. Gross

Models of neural networks have proven their utility in the development of learning algorithms in computer science and in the theoretical study of brain dynamics in computational neuroscience. We propose in this paper a spatial neural…

Neural and Evolutionary Computing · Computer Science 2014-05-06 Lucas Antiqueira , Liang Zhao

We study the problem of learning a latent tree graphical model where samples are available only from a subset of variables. We propose two consistent and computationally efficient algorithms for learning minimal latent trees, that is, trees…

Machine Learning · Statistics 2010-09-15 Myung Jin Choi , Vincent Y. F. Tan , Animashree Anandkumar , Alan S. Willsky

Randomly connected neural networks have long served as a theoretical tool for studying collective dynamics in neural populations, yet quantitative comparisons to experiments remain limited. Recent technological advances have made it…

Neurons and Cognition · Quantitative Biology 2026-05-27 Zehui Zhao , Michael J Pasek , Ilya M Nemenman

Network equilibrium models represent a versatile tool for the analysis of interconnected objects and their relationships. They have been widely employed in both science and engineering to study the behavior of complex systems under various…

Adaptation and Self-Organizing Systems · Physics 2024-10-31 Omar Aloui , David Orden , Nizar Bel Hadj Ali , Landolf Rhode-Barbarigos

We describe the use of quasiperiodic oscillators for computation and control of robots. We also describe their relationship to central pattern generators in simple organisms and develop a group theory for describing the dynamics of these…

Robotics · Computer Science 2007-05-23 E. A. Rietman , R. W. Hillis

Threads as considered in basic thread algebra are primarily looked upon as behaviours exhibited by sequential programs on execution. It is a fact of life that sequential programs are often fragmented. Consequently, fragmented program…

Logic in Computer Science · Computer Science 2011-06-17 J. A. Bergstra , C. A. Middelburg

Brain networks exhibit complications such as noise, neuron failures, and partial synaptic connectivity. These can make it difficult to model and analyze their behavior. This paper describes a way to address this difficulty, namely, breaking…

Data Structures and Algorithms · Computer Science 2025-03-25 Nancy Lynch

Knowing the symmetries of a polyhedron can be very useful for the analysis of its structure as well as for practical polyhedral computations. In this note, we study symmetry groups preserving the linear, projective and combinatorial…

Learning in living organisms is typically associated with networks of neurons. The use of large numbers of adjustable units has also been a crucial factor in the continued success of artificial neural networks. In light of the complexity of…

Neurons and Cognition · Quantitative Biology 2024-05-10 Matthew Smart , Stanislav Y. Shvartsman , Martin Mönnigmann

Neural network design has utilized flexible nonlinear processes which can mimic biological systems, but has suffered from a lack of traceability in the resulting network. Graphical probabilistic models ground network design in probabilistic…

Machine Learning · Computer Science 2015-06-19 Kenric P. Nelson , Madalina Barbu , Brian J. Scannell

This paper focuses on the modeling of musical melodies as networks. Notes of a melody can be treated as nodes of a network. Connections are created whenever notes are played in sequence. We analyze some main tracks coming from different…

Sound · Computer Science 2017-09-29 Stefano Ferretti

We compare the minimal model of a log canonical pair with the minimal model of its reduced boundary. These results are then used to study the existence of the minimal model of a semi-log-canonical pair using its normalization.

Algebraic Geometry · Mathematics 2017-09-13 Florin Ambro , János Kollár

In this article, we explore the potential of artificial neural networks, which are trained using an exceptionally simplified catalog of ideal configurations encompassing both order and disorder. We explore the generalisation power of these…

Disordered Systems and Neural Networks · Physics 2024-06-19 G. L. Garcia Pavioni , M. Arlego , C. A. Lamas

Simultaneous recordings from many neurons hide important information and the connections characterizing the network remain generally undiscovered despite the progresses of statistical and machine learning techniques. Discerning the presence…

Applications · Statistics 2019-03-21 Pietro Verzelli , Laura Sacerdote

This paper (parts I and II) provides an expository introduction to monotone and near-monotone dynamical systems associated to biochemical networks, those whose graphs are consistent or near-consistent. Many conclusions can be drawn from…

Molecular Networks · Quantitative Biology 2007-05-23 Eduardo D. Sontag

This paper describes a relatively simple way of allowing a brain model to self-organise its concept patterns through nested structures. Time is a key element and a simulator would be able to show how patterns may form and then fire in…

Neural and Evolutionary Computing · Computer Science 2014-09-05 Kieran Greer

This paper revisits the classical concept of network modularity and its spectral relaxations used throughout graph data analysis. We formulate and study several modularity statistic variants for which we establish asymptotic distributional…

Methodology · Statistics 2024-02-26 Anirban Mitra , Konasale Prasad , Joshua Cape