Related papers: Group theory of icosahedral virus capsids: a dynam…
We study the dynamics of a single collective excitation in a cold ensemble of atoms coupled to a one-dimensional waveguide. The coupling between the atoms and the photonic modes provides a coherent and a dissipative dynamics for this…
Cell-to-cell variability is inherent to numerous biological processes, including cell migration. Quantifying and characterizing the variability of migrating cells is challenging, as it requires monitoring many cells for long time windows…
We derive a mode-coupling theory for the slow dynamics of fluids confined in disordered porous media represented by spherical particles randomly placed in space. Its equations display the usual nonlinear structure met in this theoretical…
We perform an information-theoretic mode decomposition for separated aerodynamic flows. The current data-driven approach based on a neural network referred to as deep sigmoidal flow enables the extraction of an informative component from a…
The vertical as well as horizontal oscillation modes in a thermally excited two-dimensional (2D) dust coulomb cluster were investigated for particle numbers between and using both a box_tree simulation and an analytical method. The…
Cowpea chlorotic mottle virus (CCMV) is a widely used model for virus replication studies. A major challenge lies in distinguishing between the roles of the interaction between coat proteins and that between the coat proteins and the viral…
We study a simple model consisting of an atomic ion and a polar molecule trapped in a single setup, taking into consideration their electrostatic interaction. We determine analytically their collective modes of excitation as a function of…
We study dynamical properties of strongly coupled chiral matter by using holographic method. We demonstrate, at both linear and nonlinear levels, that perturbations on thermodynamically unstable backgrounds within the spinodal region of…
This paper deals with the micro-macro derivation of virus models coupled with a reaction diffusion models that generates the dynamics in space of the virus particles. The first part of the presentation focuses, starting from [5, 6] on a…
An approach to clustering is presented that adapts the basic top-down induction of decision trees method towards clustering. To this aim, it employs the principles of instance based learning. The resulting methodology is implemented in the…
The formation of a viral capsid -- the highly-ordered protein shell that surrounds the genome of a virus -- is the canonical example of self-assembly. The capsids of many positive-sense RNA viruses spontaneously assemble from in vitro…
We study experimentally the dynamics of a water droplet on a tilted and vertically oscillating rigid fibre. As we vary the frequency and amplitude of the oscillations the droplet transitions between different modes: harmonic pumping,…
A nonzero-temperature technique for strongly correlated electron lattice systems, combining elements of both variational wave function (VWF) approach and expansion in the inverse number of fermionic flavors ($1/\mathcal{N}_f$), is…
We study a coupled dynamics of a network and a particle system. Particles of density $\rho$ diffuse freely along edges, each of which is rewired at a rate given by a decreasing function of particle flux. We find that the coupled dynamics…
Most spherical viruses exhibit icosahedral symmetry, yet the growth of viral shells remains poorly understood due to the short lifetimes and broad size distribution of assembly intermediates. Classical nucleation theory has been widely…
We study the stochastic dynamics of Ising spin models with random bonds, interacting on finitely connected Poissonnian random graphs. We use the dynamical replica method to derive closed dynamical equations for the joint spin-field…
We use multi-speckle diffusive wave spectroscopy (MSDWS) to probe the micron-scale dynamics of a granular pile submitted to discrete gentle taps. The typical time-scale between plastic events is found to increase dramatically with the…
We propose a novel way of investigating the universal properties of spin systems by coupling them to an ensemble of causal dynamically triangulated lattices, instead of studying them on a fixed regular or random lattice. Somewhat…
The work deals with one of the topics of collective motion. In the frame of Nuclear Fluid Dynamics, a model which portrays the nuclear matter as a quantum elastic body, the torus-like motions and their associated energies are computed using…
We have investigated a periodically driven Creutz ladder in presence of two different driving protocols, namely, a sinusoidal drive and a $\delta$-kick imparted to the ladder at regular intervals of time. Specifically, we have studied the…