English
Related papers

Related papers: Anapedesis: Implications and Applications of Bio-S…

200 papers

Deformational structures, in many aspects generalizing standard elasticity theory, are investigated in abstract form. Within free deformational structures we define algebra of deformations, classify them by its special properties, define…

Mathematical Physics · Physics 2008-10-30 Sergey S. Kokarev

The network approach became a widely used tool to understand the behaviour of complex systems in the last decade. We start from a short description of structural rigidity theory. A detailed account on the combinatorial rigidity analysis of…

Biological Physics · Physics 2012-12-04 Merse E. Gaspar , Peter Csermely

The lifetime of protein domains and ligand-receptor complexes under force is crucial for mechanosensitive functions, while many aspects of how force affects the lifetime still remain poorly understood. Here, we report a new analytical…

Biological Physics · Physics 2018-02-15 Shiwen Guo , Qingnan Tang , Mingxi Yao , Shimin Le , Hu Chen , Jie Yan

How typical elements that shape organisms, such as protein secondary structures, have evolved, or how evolutionarily susceptible/resistant they are to environmental changes, are significant issues in evolutionary biology, structural…

Biological Physics · Physics 2025-03-18 Tomoei Takahashi , George Chikenji , Kei Tokita , Yoshiyuki Kabashima

Nature hosts a wealth of materials showcasing intricate structures intertwining order, disorder, and hierarchy, delivering resilient multifunctionality surpassing perfect crystals or simplistic disordered materials. The engineering of such…

Soft Condensed Matter · Physics 2024-01-19 Xiaoming Mao , Nicholas Kotov

A key challenge in modern computing is to develop systems that address complex, dynamic problems in a scalable and efficient way, because the increasing complexity of software makes designing and maintaining efficient and flexible systems…

Other Computer Science · Computer Science 2015-05-19 Gerard Briscoe , Paolo Dini

In the study of the basic properties observed in the immune system and, in a broader view, in biological systems, several concepts have already been mathematically formulated or treated in an analytical perspective, such as degeneracy,…

Other Quantitative Biology · Quantitative Biology 2008-01-16 Paolo Tieri , Gastone C. Castellani , Claudio Franceschi

Biological systems exhibit two structural features on many levels of organization: sparseness, in which only a small fraction of possible interactions between components actually occur; and modularity - the near decomposability of the…

Molecular Networks · Quantitative Biology 2013-12-25 Tamar Friedlander , Avraham E. Mayo , Tsvi Tlusty , Uri Alon

During the life of animals, epithelial tissues undergo extensive deformations--first to form organs during embryogensis and later to preserve integrity and function in adulthood. To what extent these deformations resemble that of non-living…

Soft Condensed Matter · Physics 2025-04-23 Urska Andrensek , Matej Krajnc

Continuum elasticity is a powerful tool applicable in a broad range of physical systems and phenomena. Yet, understanding how and on what scales material disorder may lead to the breakdown of continuum elasticity is not fully understood. We…

Soft Condensed Matter · Physics 2023-04-11 Edan Lerner , Eran Bouchbinder

Many biological processes can be thought of as the result of an underlying dynamics in which the system repeatedly undergoes distinct and abortive trajectories with the dynamical process only ending when some specific process, purpose,…

Biological Physics · Physics 2025-06-05 Jane Kondev , Marc Kirschner , Hernan G. Garcia , Gabriel L. Salmon , Rob Phillips

Robustness is key to engineering, automation, and science as a whole. However, the property of robustness is often underpinned by costly requirements such as over-provisioning, known uncertainty and predictive models, and known adversaries.…

Robotics · Computer Science 2021-09-28 Amanda Prorok , Matthew Malencia , Luca Carlone , Gaurav S. Sukhatme , Brian M. Sadler , Vijay Kumar

Biological and robotic grasp and manipulation are undeniably similar at the level of mechanical task performance. However, their underlying fundamental biological vs. engineering mechanisms are, by definition, dramatically different and can…

Robotics · Computer Science 2017-10-25 Francisco J Valero-Cuevas , Marco Santello

Biological networks are customarily described as structurally robust. This means that they often function extremely well under large forms of perturbations affecting both the concentrations and the kinetic parameters. In order to explain…

Optimization and Control · Mathematics 2026-02-20 M. Ali Al-Radhawi , David Angeli , Eduardo Sontag

Cell biomechanics involve a great number of complex phenomena that are fundamental to the evolution of life itself and other associated processes, ranging from the very early stages of embryo-genesis to the maintenance of damaged structures…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Juan Olalla-Pombo , Alberto Badías , Miguel Ángel Sanz-Gómez , José María Benítez , Francisco Javier Montáns

The incredible thermo-mechanical properties of biological materials arise from the microscopic scale due to a complex hierarchical mechanism, regulated by microinstabilities at the molecular level. The description of such complex structures…

Biological Physics · Physics 2022-10-26 Luca Bellino

Degeneracy is the ability of structurally different elements to perform the same function or yield the same output under certain constraints. In contrast to redundancy, which implies identical backups, degeneracy allows diverse components…

Networking and Internet Architecture · Computer Science 2025-06-26 Indrakshi Dey , Nicola Marchetti

Natural hard composites like human bone possess a combination of strength and toughness that exceeds that of their constituents and of many engineered composites. This augmentation is attributed to their complex hierarchical structure,…

RNA structure and functional dynamics play fundamental roles in controlling biological systems. Molecular dynamics simulation, which can characterize interactions at an atomistic level, can advance the understanding on new drug discovery,…

Molecular Networks · Quantitative Biology 2023-06-21 Hua Zheng , Wei Xie , Paul Whitford , Ailun Wang , Chunsheng Fang , Wandi Xu

In this paper, we provide an overview of the research conducted in the context of structural systems since the latest survey by Dion et al. in 2003. We systematically consider all the papers that cite this survey as well as the seminal work…

Optimization and Control · Mathematics 2020-08-27 Guilherme Ramos , A. Pedro Aguiar , Sergio Pequito