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Tanglegrams are drawings of two rooted binary phylogenetic trees and a matching between their leaf sets. The trees are drawn crossing-free on opposite sides with their leaf sets facing each other on two vertical lines. Instead of minimizing…

Data Structures and Algorithms · Computer Science 2023-05-09 Alexander Dobler , Martin Nöllenburg

A significant effort has been made to train neural networks that replicate algorithmic reasoning, but they often fail to learn the abstract concepts underlying these algorithms. This is evidenced by their inability to generalize to data…

Machine Learning · Computer Science 2020-10-26 Yujun Yan , Kevin Swersky , Danai Koutra , Parthasarathy Ranganathan , Milad Hashemi

We study the behavior of Random Walk in Random Environment (RWRE) on trees in the critical case left open in previous work. Representing the random walk by an electrical network, we assume that the ratios of resistances of neighboring edges…

Probability · Mathematics 2007-05-23 Robin Pemantle , Yuval Peres

An alternating permutation of length $n$ is a permutation $\pi=\pi_1 \pi_2 ... \pi_n$ such that $\pi_1 < \pi_2 > \pi_3 < \pi_4 > ...$. Let $A_n$ denote set of alternating permutations of ${1,2,..., n}$, and let $A_n(\sigma)$ be set of…

Combinatorics · Mathematics 2012-12-13 Joanna N. Chen , William Y. C. Chen , Robin D. P. Zhou

This paper describes experiments, on two domains, to investigate the effect of averaging over predictions of multiple decision trees, instead of using a single tree. Other authors have pointed out theoretical and commonsense reasons for…

Machine Learning · Computer Science 2013-04-10 Suk Wah Kwok , Chris Carter

We give a general construction of triangulations starting from a walk in the quarter plane with small steps, which is a discrete version of the mating of trees. We use a special instance of this construction to give a bijection between maps…

Combinatorics · Mathematics 2021-02-01 Philippe Biane

In this paper, we consider the problem of reconstructing trees from traces in the tree edit distance model. Previous work by Davies et al. (2019) analyzed special cases of reconstructing labeled trees. In this work, we significantly expand…

Computational Complexity · Computer Science 2022-01-14 Thomas Maranzatto

The study of pattern containment and avoidance for linear permutations is a well-established area of enumerative combinatorics. A cyclic permutation is the set of all rotations of a linear permutation. Callan initiated the study of…

An occurrence of a classical pattern p in a permutation \pi is a subsequence of \pi whose letters are in the same relative order (of size) as those in p. In an occurrence of a generalized pattern, some letters of that subsequence may be…

Combinatorics · Mathematics 2008-05-31 Einar Steingrimsson

In [Kit1] Kitaev discussed simultaneous avoidance of two 3-patterns with no internal dashes, that is, where the patterns correspond to contiguous subwords in a permutation. In three essentially different cases, the numbers of such…

Combinatorics · Mathematics 2007-05-23 T. Mansour , S. Kitaev

For a set $P$ of $n$ points in the plane in general position, a non-crossing spanning tree is a spanning tree of the points where every edge is a straight-line segment between a pair of points and no two edges intersect except at a common…

Previous work has studied the pattern count on singly restricted permutations. In this work, we focus on patterns of length 3 in multiply restricted permutations, especially for double and triple pattern-avoiding permutations. We derive…

Combinatorics · Mathematics 2013-02-19 Alina F. Y. Zhao

In this paper we introduce a new model of random spanning trees that we call choice spanning trees, constructed from so-called choice random walks. These are random walks for which each step is chosen from a subset of random options,…

Probability · Mathematics 2024-02-09 Eleanor Archer , Matan Shalev

We review how the monotone pattern compares to other patterns in terms of enumerative results on pattern avoiding permutations. We consider three natural definitions of pattern avoidance, give an overview of classic and recent formulas, and…

Combinatorics · Mathematics 2007-11-28 Miklos Bona

Using the theory of Properly Embedded Graphs developed in an earlier work we define an involutory duality on the set labeled non-crossing trees that lifts the obvious duality in the set of unlabeled non-crossing trees. The set of…

Combinatorics · Mathematics 2021-05-05 Nikos Apostolakis

We consider the problem of enumerating permutations with exactly r occurrences of the pattern 1324 and derive functional equations for this general case as well as for the pattern avoidance (r=0) case. The functional equations lead to a new…

Combinatorics · Mathematics 2013-09-30 Fredrik Johansson , Brian Nakamura

Decision trees are an extremely popular machine learning technique. Unfortunately, overfitting in decision trees still remains an open issue that sometimes prevents achieving good performance. In this work, we present a novel approach for…

Machine Learning · Computer Science 2019-06-05 Rafael Garcia Leiva , Antonio Fernandez Anta , Vincenzo Mancuso , Paolo Casari

A permutation is (1-23-4)-avoiding if it contains no four entries, increasing left to right, with the middle two adjacent in the permutation. Here we give a 2-variable recurrence for the number of such permutations, improving on the…

Combinatorics · Mathematics 2010-08-16 David Callan

We consider the problem of uniformly generating a spanning tree, of a connected undirected graph. This process is useful to compute statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle…

Data Structures and Algorithms · Computer Science 2020-07-08 Luís M. S. Russo , Andreia Sofia Teixeira , Alexandre P Francisco

Certain families of combinatorial objects admit recursive descriptions in terms of generating trees: each node of the tree corresponds to an object, and the branch leading to the node encodes the choices made in the construction of the…

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