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A folded type model is developed for analyzing compositional data. The proposed model involves an extension of the $\alpha$-transformation for compositional data and provides a new and flexible class of distributions for modeling data…

Machine Learning · Statistics 2019-02-27 Michail Tsagris , Connie Stewart

Many fundamental parameters of biological systems -- eg. productivity, population sizes and biomass -- are most effectively expressed in absolute terms. In contrast to proportional data (eg. percentages), absolute values provide…

Quantitative Methods · Quantitative Biology 2026-03-04 Chris Mays , Marcos Amores , Anthony Mays

Real-world networks grow over time; statistical models based on node exchangeability are not appropriate. Instead of constraining the structure of the \textit{distribution} of edges, we propose that the relevant symmetries refer to the…

Social and Information Networks · Computer Science 2025-04-02 Gecia Bravo-Hermsdorff , Lee M. Gunderson , Kayvan Sadeghi

Terrestrial ecosystems are generally green and only a small part (<10%) of the plant matter is consumed by herbivores annually,but the reason has been unclear due to the lack of food web models for predicting the absolute herbivore biomass…

Populations and Evolution · Quantitative Biology 2016-05-24 Kotaro Konno

Scale-free networks play a fundamental role in the study of complex networks and various applied fields due to their ability to model a wide range of real-world systems. A key characteristic of these networks is their degree distribution,…

Physics and Society · Physics 2025-01-14 Nixon Jerez-Lillo , Francisco A. Rodrigues , Paulo H. Ferreira , Pedro L. Ramos

Distribution shifts -- where the training distribution differs from the test distribution -- can substantially degrade the accuracy of machine learning (ML) systems deployed in the wild. Despite their ubiquity in the real-world deployments,…

A power law degree distribution is established for a graph evolution model based on the graph class of k-trees. This k-tree-based graph process can be viewed as an idealized model that captures some characteristics of the preferential…

Discrete Mathematics · Computer Science 2008-11-27 Yong Gao

Rapid advancements in genome sequencing have led to the collection of vast amounts of genomics data. Researchers may be interested in using machine learning models on such data to predict the pathogenicity or clinical significance of a…

Quantitative Methods · Quantitative Biology 2024-08-15 Arshmeet Kaur , Morteza Sarmadi

Ecosystems dynamics is often considered as driven by a coupling of species' resource consumption and its population size dynamics. Such resource-population dynamics is captured by MacArthur-type models. One biologically relevant feature…

Populations and Evolution · Quantitative Biology 2023-07-10 Elena Bellavere , Christian H. S. Hamster , Joshua A. Dijksman

Species sampling processes have long served as the fundamental framework for modeling random discrete distributions and exchangeable sequences. However, data arising from distinct but related sources require a broader notion of…

Statistics Theory · Mathematics 2026-02-03 Beatrice Franzolini , Antonio Lijoi , Igor Prünster , Giovanni Rebaudo

Load forecasting at distribution networks is more challenging than load forecasting at transmission networks because its load pattern is more stochastic and unpredictable. To plan sufficient resources and estimate DER hosting capacity, it…

Applications · Statistics 2017-03-21 Hossein Sangrody , Ning Zhou , Xingye Qiao

We propose Distributionally Balanced Designs (DBD), a new class of probability sampling designs that target representativeness at the level of the full auxiliary distribution rather than selected moments. In disciplines such as ecology,…

Methodology · Statistics 2026-03-13 Anton Grafström , Wilmer Prentius

Economy is demanding new models, able to understand and predict the evolution of markets. To this respect, Econophysics offers models of markets as complex systems, that try to comprehend macro-, system-wide states of the economy from the…

Trading and Market Microstructure · Quantitative Finance 2015-05-20 Carmen Pellicer-Lostao , Ricardo Lopez-Ruiz

To address the interlinked biodiversity and climate crises, we need an understanding of where species occur and how these patterns are changing. However, observational data on most species remains very limited, and the amount of data…

Machine Learning · Computer Science 2024-03-29 Hager Radi Abdelwahed , Mélisande Teng , David Rolnick

Data assimilation has become a key technique for combining physical models with observational data to estimate state variables. However, classical assimilation algorithms often struggle with the high nonlinearity present in both physical…

Machine Learning · Computer Science 2025-07-22 Zhuoyuan Li , Bin Dong , Pingwen Zhang

Biological sequences do not come at random. Instead, they appear with particular frequencies that reflect properties of the associated system or phenomenon. Knowing how biological sequences are distributed in sequence space is thus a…

Biological Physics · Physics 2024-04-18 Wei-Chia Chen , Juannan Zhou , David M. McCandlish

We consider an evolving network of a fixed number of nodes. The allocation of edges is a dynamical stochastic process inspired by biological reproduction dynamics, namely by deleting and duplicating existing nodes and their edges. The…

Statistical Mechanics · Physics 2007-09-14 Henrik Jeldtot Jensen

Leveraging the models' outputs, specifically the logits, is a common approach to estimating the test accuracy of a pre-trained neural network on out-of-distribution (OOD) samples without requiring access to the corresponding ground truth…

Machine Learning · Computer Science 2024-11-26 Renchunzi Xie , Ambroise Odonnat , Vasilii Feofanov , Weijian Deng , Jianfeng Zhang , Bo An

Although models for count data with over-dispersion have been widely considered in the literature, models for under-dispersion -- the opposite phenomenon -- have received less attention as it is only relatively common in particular research…

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