English
Related papers

Related papers: Developing a Theoretical Framework for Optofluidic…

200 papers

This study investigates how dynamical systems may be learned and modelled with a neuromorphic network which is itself a dynamical system. The neuromorphic network used in this study is based on a complex electrical circuit comprised of…

Disordered Systems and Neural Networks · Physics 2025-10-24 Yinhao Xu , Georg A. Gottwald , Zdenka Kuncic

Therapeutic peptides have proven to have great pharmaceutical value and potential in recent decades. However, methods of AI-assisted peptide drug discovery are not fully explored. To fill the gap, we propose a target-aware peptide design…

Biomolecules · Quantitative Biology 2024-12-10 Haitao Lin , Odin Zhang , Huifeng Zhao , Dejun Jiang , Lirong Wu , Zicheng Liu , Yufei Huang , Stan Z. Li

Diffusion and flow-based generative models have achieved remarkable success in domains such as image synthesis, video generation, and natural language modeling. In this work, we extend these advances to weight space learning by leveraging…

Machine Learning · Computer Science 2025-10-17 Daniel Saragih , Deyu Cao , Tejas Balaji

We present a novel framework to explore neural control and design of complex fluidic systems with dynamic solid boundaries. Our system features a fast differentiable Navier-Stokes solver with solid-fluid interface handling, a…

Fluid Dynamics · Physics 2024-11-04 Yifei Li , Yuchen Sun , Pingchuan Ma , Eftychios Sifakis , Tao Du , Bo Zhu , Wojciech Matusik

This paper studies the role that ontologies can play in establishing conceptual data models during the process of information systems development. A mapping algorithm has been proposed and embedded in a special purpose Transformation-Engine…

Software Engineering · Computer Science 2007-05-23 Haya El-Ghalayini , Mohammed Odeh , Richard McClatchey

This work establishes a robust mathematical foundation for compositional System Dynamics modeling, leveraging category theory to formalize and enhance the representation, analysis, and composition of system models. Here, System Dynamics…

Systems and Control · Electrical Eng. & Systems 2025-09-24 Xiaoyan Li , Evan Patterson , Patricia L. Mabry , Nathaniel D. Osgood

Design of experiments and model selection, though essential steps in data science, are usually viewed as unrelated processes in the study and analysis of biological networks. Not accounting for their inter-relatedness has the potential to…

Algebraic Geometry · Mathematics 2024-11-19 Anyu Zhang , Jingzhen Hu , Qingzhong Liang , Elena S. Dimitrova , Brandilyn Stigler

Biomarker identification is critical for precise disease diagnosis and understanding disease pathogenesis in omics data analysis, like using fold change and regression analysis. Graph neural networks (GNNs) have been the dominant deep…

Based on bottom-up assembly of highly variable neural cells units, the nervous system can reach unequalled level of performances with respect to standard materials and devices used in microelectronic. Reproducing these basic concepts in…

This article is talking about the study constructive method of structural identification systems with chaotic dynamics. It is shown that the reconstructed attractors are a source of information not only about the dynamics but also on the…

Dynamical Systems · Mathematics 2014-03-04 Evgeny Nikulchev , Oleg Kozlov

The upcoming technology support for semantic web promises fresh directions for Software Engineering community. Also semantic web has its roots in knowledge engineering that provoke software engineers to look for application of ontology…

Software Engineering · Computer Science 2013-07-17 Farheen Siddiqui , M. Afshar Alam

For biological experiments aiming at calibrating models with unknown parameters, a good experimental design is crucial, especially for those subject to various constraints, such as financial limitations, time consumption and physical…

Applications · Statistics 2014-07-22 Xiao Lin , Gabriel Terejanu

We associate learning and adaptation in living systems with the shaping of the velocity vector field in the respective dynamical systems in response to external, generally random, stimuli. With this, a mathematical concept of self-shaping…

Adaptation and Self-Organizing Systems · Physics 2015-10-08 Natalia B. Janson , Christopher J. Marsden

This paper addresses the problem of generating dynamically admissible trajectories for control tasks using diffusion models, particularly in scenarios where the environment is complex and system dynamics are crucial for practical…

Robotics · Computer Science 2025-10-15 Darshan Gadginmath , Fabio Pasqualetti

We extend the concept of optical flow to a dynamic non-Euclidean setting. Optical flow is traditionally computed from a sequence of flat images. It is the purpose of this paper to introduce variational motion estimation for images that are…

Optimization and Control · Mathematics 2013-05-22 Clemens Kirisits , Lukas F. Lang , Otmar Scherzer

We study identifiability in continuous-time linear stationary stochastic differential equations with known causal structure. Unlike existing approaches, we relax the assumption of a known diffusion matrix, thereby respecting the model's…

Statistics Theory · Mathematics 2026-03-10 Gijs van Seeventer , Saber Salehkaleybar

Purpose: Detailed surgical recognition is critical for advancing AI-assisted surgery, yet progress is hampered by high annotation costs, data scarcity, and a lack of interpretable models. While scene graphs offer a structured abstraction of…

Computer Vision and Pattern Recognition · Computer Science 2025-12-17 Felix Holm , Ghazal Ghazaei , Nassir Navab

Context: Seamless model-based development provides integrated chains of models, covering all software engineering phases. Non-functional requirements (NFRs), like reusability, further play a vital role in software and systems engineering,…

Software Engineering · Computer Science 2017-02-27 Jonas Eckhardt , Daniel Méndez Fernández , Andreas Vogelsang

This paper presents three main contributions to the field of multi-step system identification. First, drawing inspiration from Neural Network (NN) training, it introduces a tool for solving identification problems by leveraging first-order…

Systems and Control · Electrical Eng. & Systems 2025-02-17 Cesare Donati , Martina Mammarella , Fabrizio Dabbene , Carlo Novara , Constantino Lagoa

This paper describes a normative system design that incorporates diagnosis, dynamic evolution, decision making, and information gathering. A single influence diagram demonstrates the design's coherence, yet each activity is more effectively…

Artificial Intelligence · Computer Science 2013-03-08 Peter J. Regan