Related papers: An Optimal Bloom Filter Replacement Based on Matri…

We investigate the problem of maintaining an encoded distributed storage system when some nodes contain adversarial errors. Using the error-correction capabilities that are built into the existing redundancy of the system, we propose a…

Imagine handling collisions in a hash table by storing, in each cell, the bit-wise exclusive-or of the set of keys hashing there. This appears to be a terrible idea: For $\alpha n$ keys and $n$ buckets, where $\alpha$ is constant, we expect…

Given an unordered array of $N$ elements drawn from a totally ordered set and an integer $k$ in the range from $1$ to $N$, in the classic selection problem the task is to find the $k$-th smallest element in the array. We study the…

Consider graphs of n nodes, and use a Bloom filter of length 2 log3 n bits. An edge between nodes i and j, with i < j, turns on a certain bit of the Bloom filter according to a hash function on i and j. Pick a set of log n nodes and turn on…

Random access remains a central bottleneck in DNA-based data storage. Existing systems typically retrieve records by PCR enrichment or other multi-step biochemical procedures, which do not naturally support fast, massively parallel,…

As DNA data storage moves closer to practical deployment, minimizing sequencing coverage depth is essential to reduce both operational costs and retrieval latency. This paper addresses the recently studied Random Access Problem, which…

Let S be a finite, ordered alphabet, and let x = x_1 x_2 ... x_n be a string over S. A "secondary index" for x answers alphabet range queries of the form: Given a range [a_l,a_r] over S, return the set I_{[a_l;a_r]} = {i |x_i \in [a_l;…

$k-$means Clustering requires as input the exact value of $k$, the number of clusters. Two challenges are open: (i) Is there a data-determined definition of $k$ which is provably correct and (ii) Is there a polynomial time algorithm to find…

Sorting is an essential operation which is widely used and is fundamental to some very basic day to day utilities like searches, databases, social networks and much more. Optimizing this basic operation in terms of complexity as well as…

Bloom Filters are a fundamental and pervasive data structure. Within the growing area of Learned Data Structures, several Learned versions of Bloom Filters have been considered, yielding advantages over classic Filters. Each of them uses a…

While modern general-purpose computing systems have ample amounts of memory, it is still the case that embedded computer systems, such as in a refrigerator, are memory limited; hence, such embedded systems motivate the need for strictly…

A retrieval data structure stores a static function f : S -> {0,1}^r . For all x in S, it returns the r-bit value f(x), while for other inputs it may return an arbitrary result. The structure cannot answer membership queries, so it does not…

Hash based search has, proven excellence on large data warehouses stored in column store. Data distribution has significant impact on hash based search. To reduce impact of data distribution, we have proposed Memory Managed Hash (MMH)…

We introduce a new family of priority-queue data structures: partition-based simple heaps. The structures consist of $O(\log n)$ doubly-linked lists; order is enforced among data in different lists, but the individual lists are unordered.…

In this paper we compare two probabilistic data structures for association queries derived from the well-known Bloom filter: the shifting Bloom filter (ShBF), and the spatial Bloom filter (SBF). With respect to the original data structure,…

Learned Bloom Filters, i.e., models induced from data via machine learning techniques and solving the approximate set membership problem, have recently been introduced with the aim of enhancing the performance of standard Bloom Filters,…

In-place associative integer sorting technique was proposed for integer lists which requires only constant amount of additional memory replacing bucket sort, distribution counting sort and address calculation sort family of algorithms. The…

In this paper, we study the static cell probe complexity of non-adaptive data structures that maintain a subset of $n$ points from a universe consisting of $m=n^{1+\Omega(1)}$ points. A data structure is defined to be non-adaptive when the…

We study a generalization of the recently introduced order-preserving pattern matching, where instead of looking for an exact copy of the pattern, we only require that the relative order between the elements is the same. In our variant, we…

Given a pattern of length $m$ and a text of length $n$, the goal in $k$-mismatch pattern matching is to compute, for every $m$-substring of the text, the exact Hamming distance to the pattern or report that it exceeds $k$. This can be…