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We present network embedding algorithms that capture information about a node from the local distribution over node attributes around it, as observed over random walks following an approach similar to Skip-gram. Observations from…

Machine Learning · Computer Science 2021-03-23 Benedek Rozemberczki , Carl Allen , Rik Sarkar

Most complex systems can be captured by graphs or networks. Networks connect nodes (e.g.\ neurons) through edges (synapses), thus summarizing the system's structure. A popular way of interrogating graphs is community detection, which…

Physics and Society · Physics 2024-09-23 Luis F Seoane

Network topology is a fundamental aspect of network science that allows us to gather insights into the complicated relational architectures of the world we inhabit. We provide a first specific study of neighbourhood degree sequences in…

Social and Information Networks · Computer Science 2019-06-11 Keith M. Smith

The coarsest approximation of the structure of a complex network, such as the Internet, is a simple undirected unweighted graph. This approximation, however, loses too much detail. In reality, objects represented by vertices and edges in…

Networking and Internet Architecture · Computer Science 2009-11-02 Xenofontas Dimitropoulos , Dmitri Krioukov , Amin Vahdat , George Riley

Several social, medical, engineering and biological challenges rely on discovering the functionality of networks from their structure and node metadata, when it is available. For example, in chemoinformatics one might want to detect whether…

Machine Learning · Computer Science 2018-11-26 Leonardo Gutierrez Gomez , Jean-Charles Delvenne

We describe a graphical model for probabilistic relationships---an alternative to the Bayesian network---called a dependency network. The graph of a dependency network, unlike a Bayesian network, is potentially cyclic. The probability…

Artificial Intelligence · Computer Science 2013-01-18 David Heckerman , David Maxwell Chickering , Christopher Meek , Robert Rounthwaite , Carl Kadie

Visualizing network data is applicable in domains such as biology, engineering, and social sciences. We report the results of a study comparing the effectiveness of the two primary techniques for showing network data: node-link diagrams and…

Human-Computer Interaction · Computer Science 2017-09-04 Mershack Okoe , Radu Jianu , Stephen Kobourov

Network representations of systems from various scientific and societal domains are neither completely random nor fully regular, but instead appear to contain recurring structural building blocks. These features tend to be shared by…

Social and Information Networks · Computer Science 2016-10-20 Ian Barnett , Nishant Malik , Marieke L. Kuijjer , Peter J. Mucha , Jukka-Pekka Onnela

Network or graph structures are ubiquitous in the study of complex systems. Often, we are interested in complexity trends of these system as it evolves under some dynamic. An example might be looking at the complexity of a food web as…

Information Theory · Computer Science 2007-07-16 Russell K. Standish

An adjacency labeling scheme is a method that assigns labels to the vertices of a graph such that adjacency between vertices can be inferred directly from the assigned label, without using a centralized data structure. We devise adjacency…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-02-16 Casper Petersen , Noy Rotbart , Jakob Grue Simonsen , Christian Wulff-Nilsen

Network visualization allows a quick glance at how nodes (or actors) are connected by edges (or ties). A conventional network diagram of "contact tree" maps out a root and branches that represent the structure of nodes and edges, often…

Social and Information Networks · Computer Science 2014-11-04 Arnaud Sallaberry , Yang-Chih Fu , Hwai-Chung Ho , Kwan-Liu Ma

We consider methods for quantifying the similarity of vertices in networks. We propose a measure of similarity based on the concept that two vertices are similar if their immediate neighbors in the network are themselves similar. This leads…

Physics and Society · Physics 2007-05-23 E. A. Leicht , Petter Holme , M. E. J. Newman

Phylogenetic networks are used to represent the evolutionary history of species. Recently, the new class of orchard networks was introduced, which were later shown to be interpretable as trees with additional horizontal arcs. This makes the…

Combinatorics · Mathematics 2023-05-09 Leo van Iersel , Mark Jones , Esther Julien , Yukihiro Murakami

Finding vertex-to-vertex correspondences in real-world graphs is a challenging task with applications in a wide variety of domains. Structural matching based on graphs connectivities has attracted considerable attention, while the…

Data Structures and Algorithms · Computer Science 2024-10-01 Raphaël Candelier

Phylogenetic networks generalise phylogenetic trees and allow for the accurate representation of the evolutionary history of a set of present-day species whose past includes reticulate events such as hybridisation and lateral gene transfer.…

Populations and Evolution · Quantitative Biology 2018-09-05 Joan Carles Pons , Charles Semple , Mike Steel

Visualisations are commonly used to understand social, biological and other kinds of networks. Currently, we do not know how to effectively present network data to people who are blind or have low-vision (BLV). We ran a controlled study…

Human-Computer Interaction · Computer Science 2020-04-01 Yalong Yang , Kim Marriott , Matthew Butler , Cagatay Goncu , Leona Holloway

Network tomography, a classic research problem in the realm of network monitoring, refers to the methodology of inferring unmeasured network attributes using selected end-to-end path measurements. In the research community, network…

Networking and Internet Architecture · Computer Science 2020-01-10 Liang Ma , Ziyao Zhang , Mudhakar Srivatsa

Multi-relational networks capture intricate relationships in data and have diverse applications across fields such as biomedical, financial, and social sciences. As networks derived from increasingly large datasets become more common,…

Machine Learning · Computer Science 2024-11-19 Konstantinos Bougiatiotis , Georgios Paliouras

Rectangular layouts, subdivisions of an outer rectangle into smaller rectangles, have many applications in visualizing spatial information, for instance in rectangular cartograms in which the rectangles represent geographic or political…

Computational Geometry · Computer Science 2016-08-12 Kevin Buchin , David Eppstein , Maarten Löffler , Martin Nöllenburg , Rodrigo I. Silveira

A new method for identifying communities in networks is proposed. Reference nodes, either selected using a priory information about the network or according to relevant node measurements, are obtained so as to indicate putative communities.…

Social and Information Networks · Computer Science 2019-11-06 Paulo J. P. de Souza , Cesar H. Comin , Luciano da F. Costa