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We present $O(\log^2 \log n)$ time 3-coloring, maximal independent set and maximal matching algorithms for trees in the Massively Parallel Computation (MPC) model. Our algorithms are deterministic, apply to arbitrary-degree trees and work…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-11-02 Rustam Latypov , Jara Uitto

We present a new open-source cosmological code, called SWIFT, designed to solve the equations of hydrodynamics using a particle-based approach (Smooth Particle Hydrodynamics) on hybrid shared/distributed-memory architectures. SWIFT was…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-03 Matthieu Schaller , Pedro Gonnet , Aidan B. G. Chalk , Peter W. Draper

CFD users of supercomputers usually resort to rule-of-thumb methods to select the number of subdomains (partitions) when relying on MPI-based parallelization. One common approach is to set a minimum number of elements or cells per…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-30 G. Houzeaux , R. M. Badia , R. Borrell , D. Dosimont , J. Ejarque , M. Garcia-Gasulla , V. López

We present an improved method for topology optimization with both adaptive mesh refinement and derefinement. Since the total volume fraction in topology optimization is usually modest, after a few initial iterations the domain of…

Numerical Analysis · Mathematics 2010-09-28 Shun Wang , Eric de Sturler , Glaucio H. Paulino

We shall derive and propose several efficient overlapping domain decomposition methods for solving some typical linear inverse problems, including the identiffication of the flux, the source strength and the initial temperature in second…

Numerical Analysis · Mathematics 2013-09-10 Jiang Daijun , Feng Hui , Zou Jun

In tree based adaptive mesh refinement, elements are partitioned between processes using a space filling curve. The curve establishes an ordering between all elements that derive from the same root element, the tree. When representing more…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-10 Carsten Burstedde , Johannes Holke

Computing the envelope of deforming planar domains is a significant and challenging problem with a wide range of potential applications. We approximate the envelope using circular arc splines, curves that balance geometric flexibility and…

Computational Geometry · Computer Science 2025-12-01 Jana Vráblíková , Bert Jüttler

Numerical algorithms for solving problems of mathematical physics on modern parallel computers employ various domain decomposition techniques. Domain decomposition schemes are developed here to solve numerically initial/boundary value…

Numerical Analysis · Computer Science 2011-02-04 Petr N. Vabishchevich

Dynamic Parallelism (DP) is a runtime feature of the GPU programming model that allows GPU threads to execute additional GPU kernels, recursively. Apart from making the programming of parallel hierarchical patterns easier, DP can also…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-07 Felipe A. Quezada , Cristóbal A. Navarro , Miguel Romero , Cristhian Aguilera

For the study of complex synthetic and biological molecular systems by computer simulations one is still restricted to simple model systems or to by far too small time scales. To overcome this problem multiscale techniques are being…

Statistical Mechanics · Physics 2007-05-23 Matej Praprotnik , Kurt Kremer , Luigi Delle Site

Purpose: To develop a general framework for Parallel Imaging (PI) with the use of Maxwell regularization for the estimation of the sensitivity maps (SMs) and constrained optimization for the parameter-free image reconstruction. Theory and…

Image and Video Processing · Electrical Eng. & Systems 2020-08-21 Matteo Alessandro Francavilla , Stamatios Lefkimmiatis , Jorge F. Villena , Athanasios G. Polimeridis

We present a highly scalable, MPI-parallelized framework for reconstructing the initial cosmic density field, designed to meet the computational demands of next-generation cosmological simulations, particularly the upcoming ELUCID-DESI…

This paper presents an algorithm for sampling random variables that allows to separation of the sampling process into subproblems by dividing the sample space into overlapping parts. The subproblems can be solved independently of each other…

Computation · Statistics 2016-01-26 Jonas Hallgren , Timo Koski

A parallel direct solution approach based on domain decomposition method (DDM) and directed acyclic graph (DAG) scheduling is outlined. Computations are represented as a sequence of small tasks that operate on domains of DDM or dense matrix…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-13 Javad Moshfegh , Dimitrios G. Makris , Marinos N. Vouvakis

We provide a framework for the design and analysis of dynamic programming algorithms for surface-embedded graphs on n vertices and branchwidth at most k. Our technique applies to general families of problems where standard dynamic…

Data Structures and Algorithms · Computer Science 2015-03-19 Juanjo Rué , Ignasi Sau , Dimitrios M. Thilikos

Adaptive random testing (ART) improves the failure-detection effectiveness of random testing by leveraging properties of the clustering of failure-causing inputs of most faulty programs: ART uses a sampling mechanism that evenly spreads…

Software Engineering · Computer Science 2021-06-01 Muhammad Ashfaq , Rubing Huang , Dave Towey , Michael Omari , Dmitry Yashunin , Patrick Kwaku Kudjo , Tao Zhang

Interpolative and CUR decompositions involve "natural bases" of row and column subsets, or skeletons, of a given matrix that approximately span its row and column spaces. These low-rank decompositions preserve properties such as sparsity or…

Numerical Analysis · Mathematics 2023-10-17 Katherine J. Pearce , Chao Chen , Yijun Dong , Per-Gunnar Martinsson

Modeling of interacting galaxies suffers from an extended parameter space prohibiting traditional grid based search strategies. As an alternative approach a combination of a Genetic Algorithm (GA) with fast restricted N-body simulations can…

Astrophysics · Physics 2007-05-23 Christian Theis , Stefan Harfst

Brain decoding currently faces significant challenges in individual differences, modality alignment, and high-dimensional embeddings. To address individual differences, researchers often use source subject data, which leads to issues such…

Computer Vision and Pattern Recognition · Computer Science 2025-04-17 Ganxi Xu , Jinyi Long , Jia Zhang

This paper investigates the parallelization of Dijkstra's algorithm for computing the shortest paths in large-scale graphs using MPI and CUDA. The primary hypothesis is that by leveraging parallel computing, the computation time can be…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-08 Boyang Song
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