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Motivation: Clustering is a frequently used concept in variety of bioinformatical applications. We present a new method for hierarchical clustering of data called mutual information clustering (MIC) algorithm. It uses mutual information…

Quantitative Methods · Quantitative Biology 2007-05-23 Alexander Kraskov , Harald Stögbauer , Ralph G. Andrzejak , Peter Grassberger

Self-Organising Maps (SOMs) are effective tools in classification problems, and in recent years the even more powerful Dynamic Growing Neural Networks, a variant of SOMs, have been developed. Automatic Classification (also called…

Neural and Evolutionary Computing · Computer Science 2007-05-23 P. Boinee , A. De Angelis , E. Milotti

A distributed algorithm performs local computations on pieces of input and communicates the results through given communication links. When processing a massive graph in a distributed algorithm, local outputs must be configured as a…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-12-06 Fan Chung , Olivia Simpson

A Parallel Self-Organizing Map (Parallel-SOM) is proposed to modify Kohonen's SOM in parallel computing environment. In this model, two separate layers of neurons are connected together. The number of neurons in both layers and connections…

Quantum Physics · Physics 2007-05-23 Li Weigang

We attack the problem of learning concepts automatically from noisy web image search results. Going beyond low level attributes, such as colour and texture, we explore weakly-labelled datasets for the learning of higher level concepts, such…

Computer Vision and Pattern Recognition · Computer Science 2013-12-17 Eren Golge , Pinar Duygulu

Ant Colony System (ACS) is a distributed (agent- based) algorithm which has been widely studied on the Symmetric Travelling Salesman Problem (TSP). The optimum parameters for this algorithm have to be found by trial and error. We use a…

Optimization and Control · Mathematics 2018-03-23 D Gómez-Cabrero , D. N. Ranasinghe

Algorithms for node clustering typically focus on finding homophilous structure in graphs. That is, they find sets of similar nodes with many edges within, rather than across, the clusters. However, graphs often also exhibit heterophilous…

Machine Learning · Computer Science 2023-08-15 Sudhanshu Chanpuriya , Cameron Musco

Monitoring the number of insect pests is a crucial component in pheromone-based pest management systems. In this paper, we propose an automatic detection pipeline based on deep learning for identifying and counting pests in images taken…

Computer Vision and Pattern Recognition · Computer Science 2016-02-25 Weiguang Ding , Graham Taylor

Determining optimal number of clusters in a dataset is a challenging task. Though some methods are available, there is no algorithm that produces unique clustering solution. The paper proposes an Automatic Merging for Single Optimal…

Computer Vision and Pattern Recognition · Computer Science 2012-02-09 K. Karteeka Pavan , Allam Appa Rao , A. V. Dattatreya Rao

Dimensionality reduction and clustering are often used as preliminary steps for many complex machine learning tasks. The presence of noise and outliers can deteriorate the performance of such preprocessing and therefore impair the…

Machine Learning · Computer Science 2022-06-14 Abolfazl Taghribi , Kerstin Bunte , Rory Smith , Jihye Shin , Michele Mastropietro , Reynier F. Peletier , Peter Tino

The determination of cluster centers generally depends on the scale that we use to analyze the data to be clustered. Inappropriate scale usually leads to unreasonable cluster centers and thus unreasonable results. In this study, we first…

Machine Learning · Statistics 2016-10-20 Xiurui Geng , Hairong Tang

We present a novel probabilistic clustering model for objects that are represented via pairwise distances and observed at different time points. The proposed method utilizes the information given by adjacent time points to find the…

Machine Learning · Computer Science 2015-04-16 Julia E. Vogt , Marius Kloft , Stefan Stark , Sudhir S. Raman , Sandhya Prabhakaran , Volker Roth , Gunnar Rätsch

A spacially extended model of the collective behavior of a large number of locally acting organisms is proposed in which organisms move probabilistically between local cells in space, but with weights dependent on local morphogenetic…

adap-org · Physics 2008-06-25 Mark M. Millonas

Hierarchical clustering is an important technique to organize big data for exploratory data analysis. However, existing one-size-fits-all hierarchical clustering methods often fail to meet the diverse needs of different users. To address…

Machine Learning · Computer Science 2020-09-22 Weikai Yang , Xiting Wang , Jie Lu , Wenwen Dou , Shixia Liu

This paper proposes a novel Adaptive Clustering-based Reduced-Order Modeling (ACROM) framework to significantly improve and extend the recent family of clustering-based reduced-order models (CROMs). This adaptive framework enables the…

Numerical Analysis · Mathematics 2022-12-22 Bernardo P. Ferreira , F. M. Andrade Pires , Miguel A. Bessa

The concepts of convolutional neural networks (CNNs) and multi-agent systems are two important areas of research in artificial intelligence (AI). In this paper, we present an approach that builds a CNN-based colony of AI agents to serve as…

Neural and Evolutionary Computing · Computer Science 2025-04-09 Shan Suthaharan

Clustering under pairwise constraints is an important knowledge discovery tool that enables the learning of appropriate kernels or distance metrics to improve clustering performance. These pairwise constraints, which come in the form of…

Machine Learning · Computer Science 2022-03-24 Benedikt Boecking , Vincent Jeanselme , Artur Dubrawski

We consider the problem of extracting accurate average ant trajectories from many (possibly inaccurate) input trajectories contributed by citizen scientists. Although there are many generic software tools for motion tracking and specific…

Computational Geometry · Computer Science 2014-05-16 Livio De La Cruz , Stephen Kobourov , Sergey Pupyrev , Paul Shen , Sankar Veeramoni

The Blooming Tree (BT) algorithm, based on the hierarchical clustering method, is designed to identify clusters, groups, and substructures from galaxy redshift surveys. We apply the BT algorithm to a wide-field ($10\times 10$ deg$^2$)…

Cosmology and Nongalactic Astrophysics · Physics 2025-10-01 Heng Yu , Antonaldo Diaferio

A model of an Ant System where ants are controlled by a spiking neural circuit and a second order pheromone mechanism in a foraging task is presented. A neural circuit is trained for individual ants and subsequently the ants are exposed to…

Neural and Evolutionary Computing · Computer Science 2015-09-21 Cristian Jimenez-Romero , David Sousa-Rodrigues , Jeffrey H. Johnson , Vitorino Ramos