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mlpy is a Python Open Source Machine Learning library built on top of NumPy/SciPy and the GNU Scientific Libraries. mlpy provides a wide range of state-of-the-art machine learning methods for supervised and unsupervised problems and it is…

Mathematical Software · Computer Science 2012-03-02 Davide Albanese , Roberto Visintainer , Stefano Merler , Samantha Riccadonna , Giuseppe Jurman , Cesare Furlanello

An increasing volume of studies utilize geocomputation methods in large spatial data. There is a bottleneck in scalable computation for general scientific use as the existing solutions require high-performance computing domain knowledge and…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-06 Insang Song , Kyle P. Messier

We argue for the need for a new generation of data science solutions that can democratize recent advances in data engineering and artificial intelligence for non-technical users from various disciplines, enabling them to unlock the full…

In the AI-for-science era, scientific computing scenarios such as concurrent learning and high-throughput computing demand a new generation of infrastructure that supports scalable computing resources and automated workflow management on…

By bringing together code, text, and examples, Jupyter notebooks have become one of the most popular means to produce scientific results in a productive and reproducible way. As many of the notebook authors are experts in their scientific…

Software Engineering · Computer Science 2019-06-13 Jiawei Wang , Li Li , Andreas Zeller

Economies are fundamentally complex and becoming more so, but the new discipline of data science-which combines programming, statistics, and domain knowledge-can help cut through that complexity, potentially with productivity benefits to…

General Economics · Economics 2025-02-06 Arthur Turrell

Minimalist Data Wrangling with Python is envisaged as a student's first introduction to data science, providing a high-level overview as well as discussing key concepts in detail. We explore methods for cleaning data gathered from different…

Machine Learning · Computer Science 2022-11-10 Marek Gagolewski

For over a decade, the SpacePy project has contributed open-source solutions for the production and analysis of heliophysics data and simulation results. Here we introduce SpacePy's functionality for the scientific user and present relevant…

Space Physics · Physics 2022-10-11 Jonathan T. Niehof , Steven K. Morley , Daniel T. Welling , Brian A. Larsen

We introduce TurboGP, a Genetic Programming (GP) library fully written in Python and specifically designed for machine learning tasks. TurboGP implements modern features not available in other GP implementations, such as island and cellular…

Neural and Evolutionary Computing · Computer Science 2023-09-04 Lino Rodriguez-Coayahuitl , Alicia Morales-Reyes , Hugo Jair Escalante

Automated unit test generation is a well-known methodology aiming to reduce the developers' effort of writing tests manually. Prior research focused mainly on statically typed programming languages like Java. In practice, however,…

Software Engineering · Computer Science 2022-02-11 Stephan Lukasczyk , Gordon Fraser

The extraordinarily high X-ray flux and specialized instrumentation at synchrotron beamlines have enabled versatile in-situ and high throughput studies that are impossible elsewhere. Dexterous and efficient control of experiments are thus…

Computation and Language · Computer Science 2023-12-29 Daniel Potemkin , Carlos Soto , Ruipeng Li , Kevin Yager , Esther Tsai

Scientific workflows automate the analysis of large-scale scientific data, fostering the reuse of data processing operators as well as the reproducibility and traceability of analysis results. In exploratory research, however, workflows are…

Other Computer Science · Computer Science 2023-09-26 Sebastian Pohl , Nourhan Elfaramawy , Kedi Cao , Birte Kehr , Matthias Weidlich

The study of complex many-body systems via analysis of the trajectories of the units that dynamically move and interact within them is a non-trivial task. The workflow for extracting meaningful information from the raw trajectory data is…

Materials Science · Physics 2025-10-31 Simone Martino , Matteo Becchi , Andrew Tarzia , Daniele Rapetti , Giovanni M. Pavan

We present the software package binary_c-python which provides a convenient and easy-to-use interface to the binary_c framework, allowing the user to rapidly evolve individual systems and populations of stars. binary_c-python is available…

Solar and Stellar Astrophysics · Physics 2023-06-06 D. D. Hendriks , R. G. Izzard

Proof assistants enable users to develop machine-checked proofs regarding software-related properties. Unfortunately, the interactive nature of these proof assistants imposes most of the proof burden on the user, making formal verification…

Software Engineering · Computer Science 2024-05-08 Pedro Carrott , Nuno Saavedra , Kyle Thompson , Sorin Lerner , João F. Ferreira , Emily First

Compound AI applications, which compose calls to ML models using a general-purpose programming language like Python, are widely used for a variety of user-facing tasks, from software engineering to enterprise automation, making their…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-19 Stephen Mell , David Mell , Konstantinos Kallas , Steve Zdancewic , Osbert Bastani

Computational scientists are facing a new era where the old ways of developing and reusing code have to be left behind and a few daring steps are to be made towards new horizons. The present work analyzes the needs that drive this change,…

Computational Engineering, Finance, and Science · Computer Science 2021-08-23 Zsolt I. Lázár , Jouke R. Heringa , Bazil Pârv , Simon W. de Leeuw

Meta-analysis is a data aggregation method that establishes an overall and objective level of evidence based on the results of several studies. It is necessary to maintain a high level of homogeneity in the aggregation of data collected…

The traditional foundation of science lies on the cornerstones of theory and experiment. Theory is used to explain experiment, which in turn guides the development of theory. Since the advent of computers and the development of…

Computational Physics · Physics 2023-11-14 Susi Lehtola

Laboratory research is a complex, collaborative process that involves several stages, including hypothesis formulation, experimental design, data generation and analysis, and manuscript writing. Although reproducibility and data sharing are…

Other Quantitative Biology · Quantitative Biology 2025-02-12 Katharine Y. Chen , Maria Toro-Moreno , Arvind Rasi Subramaniam
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