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Anisotropy at the level of the inter-particle interaction provides the particles with specific instructions for the self-assembly of target structures. The ability to synthesize non-spherical colloids, together with the possibility of…

Soft Condensed Matter · Physics 2020-01-03 Carina Karner , Christoph Dellago , Emanuela Bianchi

Structural defects are ubiquitous in condensed matter, and not always a nuisance. For example, they underlie phenomena such as Anderson localization and hyperuniformity, and they are now being exploited to engineer novel materials. Here, we…

We study how dispersions of colloidal particles in a cholesteric liquid crystal behave under a time-dependent electric field. By controlling the amplitude and shape of the applied field wave, we show that the system can be reproducibly…

Soft Condensed Matter · Physics 2015-05-05 Giuseppe D'Adamo , D. Marenduzzo , C. Micheletti , E. Orlandini

Ground state structures found in nature are in many cases of high symmetry. But structure prediction methods typically render only a small fraction of high symmetry structures. Especially for large crystalline unit cells there are many low…

Computational Physics · Physics 2022-09-13 Hannes Huber , Martin Sommer , Moritz Gubler , Stefan Goedecker

Grouping elements into families to analyse them separately is a standard analysis procedure in many areas of sciences. We propose herein a new algorithm based on the simple idea that members from a family look like each other, and don't…

Computer Vision and Pattern Recognition · Computer Science 2025-03-26 Axel Descamps , Sélène Forget , Aliénor Lahlou , Claire Lavergne , Camille Berthelot , Guillaume Stirnemann , Rodolphe Vuilleumier , Nicolas Chéron

Genome wide comparisons between enteric bacteria yield large sets of conserved putative regulatory sites on a gene by gene basis that need to be clustered into regulons. Using the assumption that regulatory sites can be represented as…

Biological Physics · Physics 2009-11-07 Erik van Nimwegen , Mihaela Zavolan , Nikolaus Rajewsky , Eric D. Siggia

Compact plasmas, that exist near black-hole candidates and in gamma ray burst sources, commonly exhibit self-organized non-linear behavior. A model that simulates the non-linear behavior of compact radiative plasmas is constructed directly…

Astrophysics · Physics 2009-10-30 Ran Sivron

Homogeneous nucleation is formulated within the context of fluctuating hydrodynamics. It is shown that for a colloidal or macromolecular system in the strong damping limit the most likely path for nucleation can be determined by gradient…

Soft Condensed Matter · Physics 2011-10-27 James F. Lutsko

In this paper we investigate, using high resolution N-body simulations, the density profiles and the morphologies of galaxy clusters in seven models of structure formation. We show that these properties of clusters are closely related to…

Astrophysics · Physics 2015-06-24 Y. P. Jing , H. J. Mo , G. Boerner , L. Z. Fang

Spectral clustering is a well-known technique which identifies $k$ clusters in an undirected graph with weight matrix $W\in\mathbb{R}^{n\times n}$ by exploiting its graph Laplacian $L(W)$, whose eigenvalues $0=\lambda_1\leq \lambda_2 \leq…

Numerical Analysis · Mathematics 2023-06-08 Nicola Guglielmi , Stefano Sicilia

We consider a physical model where the total energy is governed by surface tension and attractive screened Coulomb potential on the 3-dimensional space. We obtain different periodic equilibrium patterns i.e. stationary sets for this energy,…

Analysis of PDEs · Mathematics 2017-11-30 Mouhamed Moustapha Fall

Networks of particles connected by springs model many condensed-matter systems, from colloids interacting with a short-range potential, to complex fluids near jamming, to self-assembled lattices, to origami-inspired materials. Under small…

Statistical Mechanics · Physics 2017-03-01 Yoav Kallus , Miranda Holmes-Cerfon

Highly symmetric nano-shells are found in many biological systems, such as clathrin cages and viral shells. Several studies have shown that symmetric shells appear in nature as a result of the free energy minimization of a generic…

Soft Condensed Matter · Physics 2014-10-06 Jef Wagner , Roya Zandi

This article investigates the properties of a few interacting particles trapped in a few wells and how these properties change under adiabatic tuning of interaction strength and inter-well tunneling. While some system properties are…

Quantum Physics · Physics 2017-05-18 N. L. Harshman

Discovery of atomistic systems with desirable properties is a major challenge in chemistry and material science. Here we introduce a novel, autoregressive, convolutional deep neural network architecture that generates molecular equilibrium…

Machine Learning · Statistics 2018-10-29 Niklas W. A. Gebauer , Michael Gastegger , Kristof T. Schütt

At the cutting edge of materials science, matter is designed to self-organize into structures that perform a wide range of functions. The past two decades have witnessed major innovations in the versatility of building blocks, ranging from…

Soft Condensed Matter · Physics 2022-09-26 Angus McMullen , Maitane Muñoz Basagoiti , Zorana Zeravcic , Jasna Brujic

In many high-dimensional problems, like sparse-PCA, planted clique, or clustering, the best known algorithms with polynomial time complexity fail to reach the statistical performance provably achievable by algorithms free of computational…

Statistics Theory · Mathematics 2025-06-17 Bertrand Even , Christophe Giraud , Nicolas Verzelen

Using the APM cluster distribution we find interesting alignment effects: (1) Cluster substructure is strongly correlated with the tendency of clusters to be aligned with their nearest neighbour and in general with the nearby clusters that…

Astrophysics · Physics 2017-01-25 Manolis Plionis

The ordering of block copolymers into lamellar microstructures is an attractive route for creating nanopatterns on scales too small to be constructed by current photolithography techniques. This utilises a technique known as graphoepitaxy…

Soft Condensed Matter · Physics 2012-03-15 W. T. Lee , N. Delaney , M. Vynnycky , M. A. Morris

To identify emerging microscopic structures in low temperature spin glasses, we study self-sustained clusters (SSC) in spin models defined on sparse random graphs. A message-passing algorithm is developed to determine the probability of…

Disordered Systems and Neural Networks · Physics 2018-07-04 Jacopo Rocchi , David Saad , Chi Ho Yeung
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