Related papers: On the locality of the Pr\"ufer code
We study the problem of computing the tightest upper and lower bounds on the probability that the sum of $n$ dependent Bernoulli random variables exceeds an integer $k$. Under knowledge of all pairs of bivariate distributions denoted by a…
We construct a refined bijection $\phi$ between alternating permutations and 0-1-2 increasing trees with degree at most 2. It satisfies that the first element of alternating permutation $\pi$ is equal to the first vertex in $\phi(\pi)$ in…
We investigate the random continuous trees called L\'evy trees, which are obtained as scaling limits of discrete Galton-Watson trees. We give a mathematically precise definition of these random trees as random variables taking values in the…
This work builds upon the recent monograph [5] on self-similar Markov trees. A self-similar Markov tree is a random real tree equipped with a function from the tree to $[0,\infty)$ that we call the decoration. Here, we construct local time…
Random binary search trees are obtained by recursively inserting the elements $\sigma(1),\sigma(2),\ldots,\sigma(n)$ of a uniformly random permutation $\sigma$ of $[n]=\{1,\dots,n\}$ into a binary search tree data structure. Devroye (1986)…
We investigate the ratio $\rho_{n,L}$ of prefix codes to all uniquely decodable codes over an $n$-letter alphabet and with length distribution $L$. For any integers $n\geq 2$ and $m\geq 1$, we construct a lower bound and an upper bound for…
Given a graph where every vertex has exactly one labeled token, how can we most quickly execute a given permutation on the tokens? In (sequential) token swapping, the goal is to use the shortest possible sequence of swaps, each of which…
Phylogenetic trees are leaf-labelled trees, where the leaves correspond to extant species (taxa), and the internal vertices represent ancestral species. The evolutionary history of a set of species can be explained by more than one…
An $[n,k]$ code $\mathcal{C}$ is said to be locally recoverable in the presence of a single erasure, and with locality parameter $r$, if each of the $n$ code symbols of $\mathcal{C}$ can be recovered by accessing at most $r$ other code…
In this study, we investigate the problem of comparing gene trees reconciled with the same species tree using a novel semi-metric, called the Path-Label Reconciliation (PLR) dissimilarity measure. This approach not only quantifies…
Recently a strong connection has been shown between the tractability of integer programming (IP) with bounded coefficients on the one side and the structure of its constraint matrix on the other side. To that end, integer linear programming…
A finite \emph{one-sided tree} of height $h$ is defined as a rooted planar tree obtained by grafting branches on one side, say the right, of a spine, i.e. a linear path of length $h$ starting at the root, such that the resulting tree has no…
We propose novel model transfer-learning methods that refine a decision forest model M learned within a "source" domain using a training set sampled from a "target" domain, assumed to be a variation of the source. We present two random…
In a {\em locally recoverable} or {\em repairable} code, any symbol of a codeword can be recovered by reading only a small (constant) number of other symbols. The notion of local recoverability is important in the area of distributed…
The goal of this paper is to study the similarity between sequences using a distance between the \emph{context} trees associated to the sequences. These trees are defined in the framework of \emph{Sparse Probabilistic Suffix Trees} (SPST),…
Species evolution is essentially a random process of interaction between biological populations and their environments. As a result, some physical parameters in evolution models are subject to statistical fluctuations. In this paper, two…
Let n be an integer greater than 1. A tree T is an n-ary tree provided that every node in T has at most n immediate successors. A forcing notion P has the n-localization property if every function from omega to omega in an extension via P…
Given a tree T, one can define the local mean at some subtree S to be the average order of subtrees containing S. It is natural to ask which subtree of order k achieves the maximal/minimal local mean among all the subtrees of the same order…
In many applications, it is necessary to determine the string similarity. Edit distance[WF74] approach is a classic method to determine Field Similarity. A well known dynamic programming algorithm [GUS97] is used to calculate edit distance…
Approximation of the optimal two-part MDL code for given data, through successive monotonically length-decreasing two-part MDL codes, has the following properties: (i) computation of each step may take arbitrarily long; (ii) we may not know…