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Identifying and comparing topological features, particularly cycles, across different topological objects remains a fundamental challenge in persistent homology and topological data analysis. This work introduces a novel framework for…

Quantitative Methods · Quantitative Biology 2025-12-16 Sixtus Dakurah

In this experimental work, the thermodynamics and self-organization of classical two-dimensional Coulomb clusters are studied as a function of the cluster size. The experiments are carried out in a DC glow discharge Argon plasma in the…

Plasma Physics · Physics 2021-07-28 M. G. Hariprasad , P. Bandyopadhyay , Garima Arora , A. Sen

Molecular dynamics (MD) simulations present a data-mining challenge, given that they can generate a considerable amount of data but often rely on limited or biased human interpretation to examine their information content. By not asking the…

Materials Science · Physics 2025-07-31 Fabrice Roncoroni , Ana Sanz-Matias , Siddharth Sundararaman , David Prendergast

Interstellar medium widely exists in the universe at multi-scales. In this study, we introduce the {\it Multi-scale Decomposition Reconstruction} method, an equation-based model designed to derive width maps of interstellar medium…

Astrophysics of Galaxies · Physics 2025-12-23 Mengke Zhao , Guang-Xing Li , Duo Xu , Keping Qiu

Recent deep networks that directly handle points in a point set, e.g., PointNet, have been state-of-the-art for supervised learning tasks on point clouds such as classification and segmentation. In this work, a novel end-to-end deep…

Computer Vision and Pattern Recognition · Computer Science 2018-04-04 Yaoqing Yang , Chen Feng , Yiru Shen , Dong Tian

The outer Galaxy presents an optimal setting for investigating molecular clouds and star formation in environments with low metallicity. A total of 72 Galactic edge clouds were surveyed using the CO\,(2--1) line with the IRAM\,30\,m…

Deformable object manipulation (DOM) with point clouds has great potential as non-rigid 3D shapes can be measured without detecting and tracking image features. However, robotic shape control of deformable objects with point clouds is…

Robotics · Computer Science 2023-11-29 Bohan Yang , Congying Sui , Fangxun Zhong , Yun-Hui Liu

Previous attempts at segmenting molecular line maps of molecular clouds have focused on using position-position-velocity data cubes of a single line to separate the spatial components of the cloud. In contrast, wide field spectral imaging…

In this paper, we present DendroMap, a novel approach to interactively exploring large-scale image datasets for machine learning (ML). ML practitioners often explore image datasets by generating a grid of images or projecting…

Human-Computer Interaction · Computer Science 2022-08-16 Donald Bertucci , Md Montaser Hamid , Yashwanthi Anand , Anita Ruangrotsakun , Delyar Tabatabai , Melissa Perez , Minsuk Kahng

We consider the problem of recovering the three-dimensional atomic structure of a flexible macromolecule from a heterogeneous cryo-EM dataset. The dataset contains noisy tomographic projections of the electrostatic potential of the…

Image and Video Processing · Electrical Eng. & Systems 2023-02-08 Carlos Esteve-Yagüe , Willem Diepeveen , Ozan Öktem , Carola-Bibiane Schönlieb

We dendrogram the Leike et al. 2020 3D dust map, leveraging its $\sim 1$ pc spatial resolution to produce a uniform catalog of molecular clouds in the solar neighborhood. Using accurate distances, we measure the properties of 65 clouds in…

Astrophysics of Galaxies · Physics 2024-02-02 Shlomo Cahlon , Catherine Zucker , Alyssa Goodman , Charles Lada , João Alves

Rigid shapes should be naturally compared up to rigid motion or isometry, which preserves all inter-point distances. The same rigid shape can be often represented by noisy point clouds of different sizes. Hence the isometry shape…

Computational Geometry · Computer Science 2021-11-09 Yury Elkin , Vitaliy Kurlin

As details are missing in most representations of structures, the lack of controllability to more information is one of the major weaknesses in structure-based controllable point cloud generation. It is observable that definitions of…

Computer Vision and Pattern Recognition · Computer Science 2024-05-07 Ximing Yang , Zhibo Zhang , Zhengfu He , Cheng Jin

Molecular clouds are sites of star formation. Magnetic fields are believed to play an important role in their dynamics and shaping morphology. We aim to study any possible correlation that might exist between the magnetic fields orientation…

Astrophysics of Galaxies · Physics 2022-10-26 Ekta Sharma , Maheswar Gopinathan , Archana Soam , Chang Won Lee , T. R. Seshadri

In this study we investigate the formation and properties of prestellar and protostellar cores using hydrodynamic, self-gravitating Adaptive Mesh Refinement simulations, comparing the cases where turbulence is continually driven and where…

Astrophysics · Physics 2009-11-13 S. S. R. Offner , M. R. Krumholz , R. I. Klein , C. F. McKee

The all-Galaxy CO survey of Dame, Hartmann, & Thaddeus (2001) is by far the most uniform, large-scale Galactic CO survey. Using a dendrogram-based decomposition of this survey, we present a catalog of 1064 massive molecular clouds…

Astrophysics of Galaxies · Physics 2016-05-25 Thomas S. Rice , Alyssa A. Goodman , Edwin A. Bergin , Christopher Beaumont , T. M. Dame

Physical systems are frequently modeled as sets of points in space, each representing the position of an atom, molecule, or mesoscale particle. As many properties of such systems depend on the underlying ordering of their constituent…

Other Condensed Matter · Physics 2015-11-18 Emanuel A. Lazar , Jian Han , David J. Srolovitz

Granular materials react to shear stresses differently than do ordinary fluids. Rather than deforming uniformly, materials such as dry sand or cohesionless powders develop shear bands: narrow zones containing large relative particle motion…

Finding the dense regions of a graph and relations among them is a fundamental problem in network analysis. Core and truss decompositions reveal dense subgraphs with hierarchical relations. The incremental nature of algorithms for computing…

Social and Information Networks · Computer Science 2018-09-17 Ahmet Erdem Sariyuce , C. Seshadhri , Ali Pinar