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A mechanism of double strand breaking (DSB) in DNA due to the action of two electrons is considered. These are the electrons produced in the vicinity of DNA molecules due to ionization of water molecules with a consecutive emission of two…

Biological Physics · Physics 2015-06-03 Eugene Surdutovich , Andrey V. Solov'yov

According to the experimental evidence damage induced by densely ionizing radiation in mammalian cells is distributed along the DNA molecule in the form of clusters. The most critical constituent of DNA damage are double-strand breaks…

Biological Physics · Physics 2007-05-23 E. Gudowska-Nowak , M. Kraemer , G. Kraft , G. Taucher-Scholz

The radiation-induced damages in bio-molecules are ubiquitous processes in radiotherapy, radio-biology and critical to space-projects. In this study we present a precise quantification of the fragmentation mechanisms of deoxyribonucleic…

Biological Physics · Physics 2022-01-28 Santosh KC , Ramin Abolfath

For efficient application of protons and light ions in radiotherapy, detailed knowledge and realistic models of the corresponding radiobiological mechanism are necessary. Basic characteristics of this mechanism have been represented within…

Biological Physics · Physics 2007-05-23 Pavel Kundrat , Hana Hromcikova , Milos Lokajicek

DNA double-strand breaks (DSBs) represent a serious source of damage for all living things and thus there have been many quantitative studies of DSBs both in vivo and in vitro. Despite this fact, the processes that lead to their production…

Biomolecules · Quantitative Biology 2015-06-05 Shunsuke F. Shimobayashi , Takafumi Iwaki , Toshiaki Mori , Kenichi Yoshikawa

Model of biological effects of ionizing particles, especially of protons and other ions, is proposed. The model is based on distinguishing the single-particle and collective effects of the underlying radiobiological mechanism. The…

Biological Physics · Physics 2016-08-16 Pavel Kundrát , Miloš Lokajíček , Hana Hromčíková

The target theory is the most classical hypothesis explaining radiation-induced cell death, the physical or biological nature of the "target" remains ambiguous. This study hypothesizes that the distribution of DNA double-strand breaks…

Medical Physics · Physics 2025-06-11 Ankang Hu , Wanyi Zhou , Xiyu Luo , Rui Qiu , Junli Li

It has been reported that damage of genome in a living cell by ionizing radiation is about one-third direct and two-thirds indirect. The former which has been introduced in our last paper, concerns direct energy deposition and ionizing…

Biological Physics · Physics 2010-04-27 Wei Wang , Zengliang Yu , Wenhui Su

We propose a multi-scale approach to understand the physics related to ion-beam cancer therapy. It allows the calculation of the probability of DNA damage as a result of irradiation of tissues with energetic ions, up to 430 MeV/u. This…

Biological Physics · Physics 2009-11-13 Andrey V. Solov'yov , Eugene Surdutovich , Emanuele Scifoni , Igor Mishustin , Walter Grainer

Ion beams have been widely applied in a few biological research fields such as radioactive breeding, health protection, and tumor therapy. Up to now many interesting and impressive achievements in biology and agriculture have been made.…

Biological Physics · Physics 2011-02-02 Wei Wang , Zengliang Yu , Wenhui Su

Numerical simulations are performed on a stochastic model based on Monte Carlo damage simulation process and Markov Chain Monte Carlo techniques to investigate the formation and evaluation of isolated and multiple DNA damage and cellular…

Quantitative Methods · Quantitative Biology 2019-11-20 M. Loan , B. Freeman , A. Bhat , M. Tantary , M. Brown , K. Virk

We report in situ single-molecule measurements of proton-induced double-strand breaks (DSBs) in DNA immersed in water, using real-time fluorescence tracking along the entire proton path, including the Bragg peak region. By chemically…

Biological Physics · Physics 2025-10-03 R. Liénard , P. Barberet , K. Chatzipapas , G. Devès , T. Dhôte , T. Guérin , H. Seznec , F. Gobet

The variation of the oxygen enhancement ratio (OER) across Linear Energy Transfer (LET) currently lacks a comprehensive mechanistic interpretation and a mechanistic model. Our earlier research revealed a significant correlation between the…

Biological Physics · Physics 2025-10-15 Ankang Hu , Wanyi Zhou , Xiyu Luo , Rui Qiu , Junli Li

In previous work, we constructed a statistical framework for estimating the rate of clustered ionization from charged particle radiation in DNA. This model is extended to include contributions from secondary electrons. Using a simple…

Medical Physics · Physics 2023-11-17 Kay Kinoshita , Yusra Zabarmawi

Double-strand breaks (DSBs) in DNA are naturally occurring destructive events in all organisms that may lead to genome instability. Cells employ various repair methods known as non-homologous end joining (NHEJ), microhomology mediated end…

In order to study the molecular damage induced in the form of single-strand and double-strand breaks by the ionizing radiation at the DNA level, Geant4-DNA Monte Carlo simulation code for complete transportation of primary protons and other…

Biological Physics · Physics 2018-10-10 Mojtaba Mokari , Mohammad Hassan Alamatsaz , Hossein Moeini , Reza Taleei

Double electron ionisation process occurs when an intense laser pulse interacts with atoms or molecules. Exact {\it ab initio} numerical simulation of such a situation is extremely computer resources demanding, thus often one is forced to…

This paper focuses on the analytic modelling of responses of cells in the body to ionizing radiation. The related mechanisms are consecutively taken into account and discussed. A model of the dose- and time-dependent adaptive response is…

We propose a multi-scale approach to understanding physics related to the ion/proton-beam cancer therapy and calculation of the probability of the DNA damage as a result of irradiation of patients with energetic (up to 430 MeV/u) ions. This…

Biological Physics · Physics 2009-11-13 A. V. Solov'yov , E. Surdutovich , E. Scifoni , I. Mishustin , W. Greiner

Irradiation of cell monolayers by monoenergetic ions has made it possible to establish survival curves at individual values of linear energy transfer. The two-step model of radiobiological mechanism proposed recently by Judas and Lokajicek…

Medical Physics · Physics 2007-05-23 Pavel Kundrat , Milos Lokajicek , Hana Hromcikova
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