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Biological systems operate under persistent noise, which can alter system states and induce transitions between attractors. Here, we study the attractor dynamics of Boolean networks focusing on the transitions between attractors induced by…

Molecular Networks · Quantitative Biology 2026-03-05 Byungjoon Min , Jeehye Choi , Reinhard Laubenbacher

To be effective in sequential data processing, Recurrent Neural Networks (RNNs) are required to keep track of past events by creating memories. While the relation between memories and the network's hidden state dynamics was established over…

Machine Learning · Computer Science 2019-09-17 Doron Haviv , Alexander Rivkind , Omri Barak

Recurrent neural networks (RNNs) are capable of learning features and long term dependencies from sequential and time-series data. The RNNs have a stack of non-linear units where at least one connection between units forms a directed cycle.…

Neural and Evolutionary Computing · Computer Science 2018-02-26 Hojjat Salehinejad , Sharan Sankar , Joseph Barfett , Errol Colak , Shahrokh Valaee

Neural dynamical systems with stable attractor structures, such as point attractors and continuous attractors, are hypothesized to underlie meaningful temporal behavior that requires working memory. However, working memory may not support…

Neurons and Cognition · Quantitative Biology 2023-08-25 Il Memming Park , Ábel Ságodi , Piotr Aleksander Sokół

Synaptic connections between neurons in the brain are dynamic because of continuously ongoing spine dynamics, axonal sprouting, and other processes. In fact, it was recently shown that the spontaneous synapse-autonomous component of spine…

Neurons and Cognition · Quantitative Biology 2018-01-08 David Kappel , Robert Legenstein , Stefan Habenschuss , Michael Hsieh , Wolfgang Maass

This research addresses the challenge of characterizing the complexity and unpredictability of basins within various dynamical systems. The main focus is on demonstrating the efficiency of convolutional neural networks (CNNs) in this field.…

Machine Learning · Computer Science 2024-06-18 David Valle , Alexandre Wagemakers , Miguel A. F. Sanjuán

In spite of the recent interest and advances in linear controllability of complex networks, controlling nonlinear network dynamics remains to be an outstanding problem. We develop an experimentally feasible control framework for nonlinear…

Molecular Networks · Quantitative Biology 2015-09-24 Le-Zhi Wang , Ri-Qi Su , Zi-Gang Huang , Xiao Wang , Wenxu Wang , Celso Grebogi , Ying-Cheng Lai

We consider a neural network with adapting synapses whose dynamics can be analitically computed. The model is made of $N$ neurons and each of them is connected to $K$ input neurons chosen at random in the network. The synapses are…

Disordered Systems and Neural Networks · Physics 2009-10-30 G. Lattanzi , G. Nardulli , G. Pasquariello , S. Stramaglia

Neuronal networking supports complex brain functions, with neurotransmitters facilitating communication through chemical synapses. The release probability of neurotransmitters varies and is influenced by pre-synaptic neuronal activity.…

Neurons and Cognition · Quantitative Biology 2024-06-12 Zihan Liu , Flavia Nathaline Chanentia , Patteera Supvithayanong , Chi Chung Alan Fung

We extend a recently introduced class of exactly solvable models for recurrent neural networks with competition between 1D nearest neighbour and infinite range information processing. We increase the potential for further frustration and…

Disordered Systems and Neural Networks · Physics 2009-10-31 N. S. Skantzos , A. C. C. Coolen

Important insights towards the explainability of neural networks reside in the characteristics of their decision boundaries. In this work, we borrow tools from the field of adversarial robustness, and propose a new perspective that relates…

Machine Learning · Computer Science 2020-10-16 Guillermo Ortiz-Jimenez , Apostolos Modas , Seyed-Mohsen Moosavi-Dezfooli , Pascal Frossard

Convolutional neural networks (CNNs) have had great success in many real-world applications and have also been used to model visual processing in the brain. However, these networks are quite brittle - small changes in the input image can…

Neurons and Cognition · Quantitative Biology 2018-10-30 Brian Hu , Stefan Mihalas

A common problem in time series analysis is to predict dynamics with only scalar or partial observations of the underlying dynamical system. For data on a smooth compact manifold, Takens theorem proves a time delayed embedding of the…

Machine Learning · Computer Science 2023-04-12 Charles D. Young , Michael D. Graham

Neural network models in neuroscience allow one to study how the connections between neurons shape the activity of neural circuits in the brain. In this chapter, we study Combinatorial Threshold-Linear Networks (CTLNs) in order to…

Neurons and Cognition · Quantitative Biology 2018-04-05 Katherine Morrison , Carina Curto

When is it safe to approximate a complicated random Boolean network (RBN) as a simplified, easier to model RBN? When can static measures of network structure be reliably used to infer the network's dynamics? This simple experiment tests the…

Adaptation and Self-Organizing Systems · Physics 2010-05-20 Shaun Deaton , Seth Frey

Autonomous driving technology is progressing rapidly, largely due to complex End To End systems based on deep neural networks. While these systems are effective, their complexity can make it difficult to understand their behavior, raising…

Robotics · Computer Science 2024-12-24 Iqra Aslam , Igor Anpilogov , Andreas Rausch

Modeling of conservative systems with neural networks is an area of active research. A popular approach is to use Hamiltonian neural networks (HNNs) which rely on the assumptions that a conservative system is described with Hamilton's…

Artificial Intelligence · Computer Science 2024-07-18 Katsiaryna Haitsiukevich , Alexander Ilin

Circuits of biological neurons, such as in the functional parts of the brain can be modeled as networks of coupled oscillators. Inspired by the ability of these systems to express a rich set of outputs while keeping (gradients of) state…

Machine Learning · Computer Science 2021-03-16 T. Konstantin Rusch , Siddhartha Mishra

In this study, we investigate the continuous time dynamics of Recurrent Neural Networks (RNNs), focusing on systems with nonlinear activation functions. The objective of this work is to identify conditions under which RNNs exhibit perpetual…

Machine Learning · Computer Science 2025-04-22 Michele Casoni , Tommaso Guidi , Alessandro Betti , Stefano Melacci , Marco Gori

We study how the dynamics of a class of discrete dynamical system models for neuronal networks depends on the connectivity of the network. Specifically, we assume that the network is an Erd\H{o}s-R\'{enyi} random graph and analytically…

Dynamical Systems · Mathematics 2014-04-23 Winfried Just , Sungwoo Ahn