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We present a theoretical framework using quorum-percolation for describing the initiation of activity in a neural culture. The cultures are modeled as random graphs, whose nodes are excitatory neurons with kin inputs and kout outputs, and…

Neurons and Cognition · Quantitative Biology 2010-09-28 J. -P. Eckmann , Elisha Moses , Olav Stetter , Tsvi Tlusty , Cyrille Zbinden

Much progress has been made in uncovering the computational capabilities of spiking neural networks. However, spiking neurons will always be more expensive to simulate compared to rate neurons because of the inherent disparity in time…

Neurons and Cognition · Quantitative Biology 2013-10-31 Michael A. Buice , Carson C. Chow

Community detection is a very active field in complex networks analysis, consisting in identifying groups of nodes more densely interconnected relatively to the rest of the network. The existing algorithms are usually tested and compared on…

Social and Information Networks · Computer Science 2012-08-16 Günce Orman , Vincent Labatut , Hocine Cherifi

A fundamental problem in the analysis of network data is the detection of network communities, groups of densely interconnected nodes, which may be overlapping or disjoint. Here we describe a method for finding overlapping communities based…

Social and Information Networks · Computer Science 2015-03-19 Brian Ball , Brian Karrer , M. E. J. Newman

Neurons in the primary visual cortex are more or less selective for the orientation of a light bar used for stimulation. A broad distribution of individual grades of orientation selectivity has in fact been reported in all species. A…

Neurons and Cognition · Quantitative Biology 2015-06-19 Sadra Sadeh , Stefan Rotter

We survey some of the concepts, methods, and applications of community detection, which has become an increasingly important area of network science. To help ease newcomers into the field, we provide a guide to available methodology and…

Physics and Society · Physics 2016-09-08 Mason A. Porter , Jukka-Pekka Onnela , Peter J. Mucha

We study the macroscopic dynamics of large networks of excitable type 1 neurons composed of two populations interacting with disparate but symmetric intra- and inter-population coupling strengths. This nonuniform coupling scheme facilitates…

Adaptation and Self-Organizing Systems · Physics 2021-03-17 Benjamin Jüttner , Christian Henriksen , Erik A. Martens

Many methods have been proposed to detect communities, not only in plain, but also in attributed, directed or even dynamic complex networks. In its simplest form, a community structure takes the form of a partition of the node set. From the…

Social and Information Networks · Computer Science 2014-10-22 Günce Keziban Orman , Vincent Labatut , Marc Plantevit , Jean-François Boulicaut

A feature of the brains of intelligent animals is the ability to learn to respond to an ensemble of active neuronal inputs with a behaviorally appropriate ensemble of active neuronal outputs. Previously, a hypothesis was proposed on how…

Neurons and Cognition · Quantitative Biology 2025-02-04 Marat M. Rvachev

Neurons in cortical circuits exhibit coordinated spiking activity, and can produce correlated synchronous spikes during behavior and cognition. We recently developed a method for estimating the dynamics of correlated ensemble activity by…

Neurons and Cognition · Quantitative Biology 2013-12-17 Hideaki Shimazaki

In this paper, we clarify the mechanisms underlying a general phenomenon present in pulse-coupled heterogeneous inhibitory networks: inhibition can induce not only suppression of the neural activity, as expected, but it can also promote…

Neurons and Cognition · Quantitative Biology 2017-05-23 David Angulo-Garcia , Stefano Luccioli , Simona Olmi , Alessandro Torcini

Neuronal firing activities have attracted a lot of attention since a large population of spatiotemporal patterns in the brain is the basis for adaptive behavior and can also reveal the signs for various neurological disorders including…

Neurons and Cognition · Quantitative Biology 2017-03-13 Wenyuan Li , Igor V. Ovchinnikov , Honglin Chen , Zhe Wang , Albert Lee , Hochul Lee , Carlos Cepeda , Robert N. Schwartz , Karlheinz Meier , Kang L. Wang

Polychronous neural groups are effective structures for the recognition of precise spike-timing patterns but the detection method is an inefficient multi-stage brute force process that works off-line on pre-recorded simulation data. This…

Neural and Evolutionary Computing · Computer Science 2017-07-12 Joseph Chrol-Cannon , Yaochu Jin , André Grüning

It is commonly observed that deep networks trained for classification exhibit class-selective neurons in their early and intermediate layers. Intriguingly, recent studies have shown that these class-selective neurons can be ablated without…

Machine Learning · Computer Science 2023-05-30 Omkar Ranadive , Nikhil Thakurdesai , Ari S Morcos , Matthew Leavitt , Stéphane Deny

We develop an algorithm to detect community structure in complex networks. The algorithm is based on spectral methods and takes into account weights and links orientations. Since the method detects efficiently clustered nodes in large…

Disordered Systems and Neural Networks · Physics 2009-11-10 Andrea Capocci , Vito D. P. Servedio , Guido Caldarelli , Francesca Colaiori

We review different aspects of the simulation of spiking neural networks. We start by reviewing the different types of simulation strategies and algorithms that are currently implemented. We next review the precision of those simulation…

Spiking neuronal networks are usually simulated with three main simulation schemes: the classical time-driven and event-driven schemes, and the more recent hybrid scheme. All three schemes evolve the state of a neuron through a series of…

Neurons and Cognition · Quantitative Biology 2018-01-24 Jeyashree Krishnan , PierGianLuca Porta Mana , Moritz Helias , Markus Diesmann , Edoardo Di Napoli

We study a network model of two conductance-based pacemaker neurons of differing natural frequency, coupled with either mutual excitation or inhibition, and receiving shared random inhibitory synaptic input. The networks may phase-lock…

Neurons and Cognition · Quantitative Biology 2009-11-13 Ramana Dodla , Charles J. Wilson

We study dynamics of a reverberating neural net by means of computer simulation. The net, which is composed of 9 leaky integrate-and-fire (LIF) neurons arranged in a square lattice, is fully connected with interneuronal communication delay…

Neurons and Cognition · Quantitative Biology 2023-06-16 A. Vidybida , O. Shchur

Several experimental studies show the existence of leader neurons in population bursts of 2D living neural networks. A leader neuron is, basically, a neuron which fires at the beginning of a burst (respectively network spike) more often…

Biological Physics · Physics 2010-04-19 Cyrille Zbinden