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The most fundamental model of a molecule is a cloud of unordered atoms, even without chemical bonds that can depend on thresholds for distances and angles. The strongest equivalence between clouds of atoms is rigid motion, which is a…

Computational Geometry · Computer Science 2023-11-01 Vitaliy Kurlin

An earlier finding that the van der waals radii are related to their de broglie wavelengths for some non-metallic elements has been extended here to show that in fact, they vary linearly with the ground state bohr radii for all the elements…

General Physics · Physics 2008-01-22 Raji Heyrovska

We show that the charge radii of neighboring atomic nuclei, independent of atomic number and charge, follow remarkably very simple relations, despite the fact that atomic nuclei are complex finite many-body systems governed by the laws of…

Nuclear Theory · Physics 2014-11-25 B. H. Sun , Y. Lu , J. P. Peng , C. Y. Liu , Y. M. Zhao

The covalent-like characteristics of hydrogen bonds offer a new perspective on intermolecular interactions. Here, using density functional theory and post-Hartree-Fock methods, we reveal that there are two bonding molecular orbitals (MOs)…

Atomic and Molecular Clusters · Physics 2015-07-09 Bo Wang , Wanrun Jiang , Xing Dai , Yang Gao , Zhigang Wang , Rui-Qin Zhang

The Structural theory of chemistry introduces chemical/molecular structure as a combination of relative arrangement and bonding patterns of atoms in molecule. Nowadays, the structure of atoms in molecules is derived from the topological…

Chemical Physics · Physics 2014-12-22 Mohammad Goli , Shant Shahbazian

The latest research of the proportionality of atomic weights of chemical elements made it possible to obtain 3 x 3 matrices for the calculation of information coefficients of proportionality Ip that can be used for 3D modeling of the…

General Physics · Physics 2012-07-20 Mikhail M. Labushev

Lines and circles pose significant scalability challenges in synthetic geometry. A line with $n$ points implies ${n \choose 3}$ collinearity atoms, or alternatively, when lines are represented as functions, equality among ${n \choose 2}$…

Data Structures and Algorithms · Computer Science 2021-02-10 Daniel Selsam , Jesse Michael Han

Studies of coevolution of amino acids within and between proteins have revealed two types of coevolving units: coevolving contacts, which are pairs of amino acids distant along the sequence but in contact in the three-dimensional structure,…

Biomolecules · Quantitative Biology 2015-06-12 Olivier Rivoire

Two-dimensional atomic arrays exhibit a number of intriguing quantum optical phenomena, including subradiance, nearly perfect reflection of radiation and long-lived topological edge states. Studies of emission and scattering of photons in…

For more than 150 years the structure of the periodic system of the chemical elements has intensively motivated research in different areas of chemistry and physics. However, there is still no unified picture of what a periodic system is.…

Discrete Mathematics · Computer Science 2019-05-16 Wilmer Leal , Guillermo Restrepo

In this paper, we address the challenge of obtaining a comprehensive and symmetric representation of point particle groups, such as atoms in a molecule, which is crucial in physics and theoretical chemistry. The problem has become even more…

Chemical Physics · Physics 2024-02-13 Jigyasa Nigam , Sergey N. Pozdnyakov , Kevin K. Huguenin-Dumittan , Michele Ceriotti

When flat or on a firm mechanical substrate, the atomic composition and atomistic structure of two-dimensional crystals dictate their chemical, electronic, optical, and mechanical properties. These properties change when the two-dimensional…

Mesoscale and Nanoscale Physics · Physics 2014-02-27 Alejandro A. Pacheco Sanjuan , Mehrshad Mehboudi , Edmund O. Harriss , Humberto Terrones , Salvador Barraza-Lopez

There are views prevalent in the noncovalent chemistry literature that i) the O atom in molecules cannot form a chalcogen bond, and ii) if formed, this bond is very weak. We have shown in this study that these views are not necessarily true…

Chemical Physics · Physics 2022-10-24 Pradeep Varadwaj , Arpita Varadwaj , Helder Marques

Using a break junction technique, we find a clear signature for the formation of conducting hybrid junctions composed of a single organic molecule (benzene, naphthalene or anthracene) connected to chains of platinum atoms. The hybrid…

Mesoscale and Nanoscale Physics · Physics 2015-06-23 Tamar Yelin , Ran Vardimon , Natalia Kuritz , Richard Korytár , Alexei Bagrets , Ferdinand Evers , Leeor Kronik , Oren Tal

Chemical bonding governs how atoms interact to form compounds, thereby determining their physicochemical properties. Despite being an elusive concept, chemical bonding has led to the development of models and tools to explain and predict…

Materials Science · Physics 2026-02-26 Gabriele Saleh , Liberato Manna

The present work continues our previous studies of pom-pom molecule [K. Haydukivska, O. Kalyuzhnyi, V. Blavatska, and J. Ilnytskyi, J. Mol. Liq. 328, 115456 (2021); Condens. Matter Phys. 25, 23302 (2022)]. The molecule consists of a linear…

Soft Condensed Matter · Physics 2023-05-26 K. Haydukivska , V. Blavatska

Nuclides sharing the same mass number (isobars) are observed ubiquitously along the stability line. While having nearly identical radii, stable isobars can differ in shape, and present in particular different quadrupole deformations. We…

Nuclear Theory · Physics 2021-11-03 Giuliano Giacalone , Jiangyong Jia , Vittorio Somà

An RNA molecule is structured on several layers. The primary and most obvious structure is its sequence of bases, i.e. a word over the alphabet {A,C,G,U}. The higher structure is a set of one-to-one base-pairings resulting in a…

Data Structures and Algorithms · Computer Science 2007-05-23 Michael Brinkmeier

Covalent molecules are characterized by directed bonds, which provide stability-of-form to the molecules relative atomic positions. In contrast, bulk metals are characterized by delocalized bonds, where a large number of resonance…

Mesoscale and Nanoscale Physics · Physics 2013-05-27 Harsh Deep Chopra , J. N. Armstrong , Susan Z. Hua

Rajasekharan and Girgis reported that binary systems with intermetallic compounds of a particular crystal structure form a straight line on a map using Miedema parameters. In this paper, the universality of that observation is examined.…

Materials Science · Physics 2009-09-30 T. Rajasekharan , V. Seshubai