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Modeling and topological analysis of networks in biological and other complex systems, must venture beyond the limited consideration of very few network metrics like degree, betweenness or assortativity. A proper identification of…

Quantitative Methods · Quantitative Biology 2012-09-25 Soumen Roy

Pathways are integral to systems biology. Their classical representation has proven useful but is inconsistent in the meaning assigned to each arrow (or edge) and inadvertently implies the isolation of one pathway from another. Conversely,…

It is difficult to detect and evaluate the number of communities in complex networks, especially when the situation involves with an ambiguous boundary between the inner- and inter-community densities. In this paper, Discrete Nodal Domain…

Physics and Society · Physics 2015-06-03 Bian He , Lei Gu , Xiao-Dong Zhang

The problem of sending the maximum amount of flow $q$ between two arbitrary nodes $s$ and $t$ of complex networks along links with unit capacity is studied, which is equivalent to determining the number of link-disjoint paths between $s$…

Statistical Mechanics · Physics 2007-05-23 Deok-Sun Lee , Heiko Rieger

A concept of higher order neighborhood in complex networks, introduced previously (PRE \textbf{73}, 046101, (2006)), is systematically explored to investigate larger scale structures in complex networks. The basic idea is to consider each…

Statistical Mechanics · Physics 2016-08-16 Roberto F. S. Andrade , José G. V. Miranda , Suani T. R. Pinho , Thierry Petit Lobão

High order networks are weighted hypergraphs col- lecting relationships between elements of tuples, not necessarily pairs. Valid metric distances between high order networks have been defined but they are difficult to compute when the…

Social and Information Networks · Computer Science 2016-05-04 Weiyu Huang , Alejandro Ribeiro

Estimating influential nodes in large scale networks including but not limited to social networks, biological networks, communication networks, emerging smart grids etc. is a topic of fundamental interest. To understand influences of nodes…

Social and Information Networks · Computer Science 2014-06-13 Sima Das

We review the main tools which allow for the statistical characterization of weighted networks. We then present two case studies, the airline connection network and the scientific collaboration network, which are representative of critical…

Statistical Mechanics · Physics 2009-11-10 Marc Barthelemy , Alain Barrat , Romualdo Pastor-Satorras , Alessandro Vespignani

Community structure is one of the key properties of complex networks and plays a crucial role in their topology and function. While an impressive amount of work has been done on the issue of community detection, very little attention has…

Physics and Society · Physics 2010-09-17 Andrea Lancichinetti , Mikko Kivela , Jari Saramaki , Santo Fortunato

The application of network techniques to the analysis of neural data has greatly improved our ability to quantify and describe these rich interacting systems. Among many important contributions, networks have proven useful in identifying…

Quantitative Methods · Quantitative Biology 2018-06-14 Ann E. Sizemore , Jennifer Phillips-Cremins , Robert Ghrist , Danielle S. Bassett

A new method for identifying communities in networks is proposed. Reference nodes, either selected using a priory information about the network or according to relevant node measurements, are obtained so as to indicate putative communities.…

Social and Information Networks · Computer Science 2019-11-06 Paulo J. P. de Souza , Cesar H. Comin , Luciano da F. Costa

The network of networks(NON) research is focused on studying the properties of n interdependent networks which is ubiquitous in the real world. Identifying the influential nodes in the network of networks is theoretical and practical…

Social and Information Networks · Computer Science 2015-01-26 Meizhu Li , Qi Zhang , Qi Liu , Yong Deng

In the last few years many real-world networks have been found to show a so-called community structure organization. Much effort has been devoted in the literature to develop methods and algorithms that can efficiently highlight this hidden…

Social and Information Networks · Computer Science 2012-06-18 Michele Coscia , Fosca Giannotti , Dino Pedreschi

We provide a short introduction to the field of topological data analysis and discuss its possible relevance for the study of complex systems. Topological data analysis provides a set of tools to characterise the shape of data, in terms of…

Data Analysis, Statistics and Probability · Physics 2018-12-05 Vsevolod Salnikov , Daniele Cassese , Renaud Lambiotte

Understanding how different networks relate to each other is key for obtaining a greater insight into complex systems. Here, we introduce an intuitive yet powerful framework to characterise the relationship between two networks comprising…

Social and Information Networks · Computer Science 2023-08-09 Andrea I. Luppi , Eckehard Olbrich , Conor Finn , Laura E. Suárez , Fernando E. Rosas , Pedro A. M. Mediano , Jürgen Jost

The representation of complex systems as networks is inappropriate for the study of certain problems. We show several examples of social, biological, ecological and technological systems where the use of complex networks gives very limited…

Physics and Society · Physics 2013-04-02 Ernesto Estrada , Juan A. Rodriguez-Velazquez

Networks offer a powerful approach to modeling complex systems by representing the underlying set of pairwise interactions. Link prediction is the task that predicts links of a network that are not directly visible, with profound…

Physics and Society · Physics 2024-04-22 Yijun Ran , Xiao-Ke Xu , Tao Jia

The possibility to identify the nature (e.g. random or scale free) of complex networks while performing respective random walks is investigated with respect to autonomous agents based on Bayesian decision theory and humans navigating…

Computational Physics · Physics 2007-05-23 Filipi Nascimento Silva , Luciano da Fontoura Costa

Social networks existing among employees, customers or users of various IT systems have become one of the research areas of growing importance. A social network consists of nodes - social entities and edges linking pairs of nodes. In…

Social and Information Networks · Computer Science 2012-07-19 Piotr Bródka , Przemysław Kazienko , Katarzyna Musiał , Krzysztof Skibicki

Networks are ubiquitous structure that describes complex relationships between different entities in the real world. As a critical component of prediction task over nodes in networks, learning the feature representation of nodes has become…

Machine Learning · Computer Science 2018-09-10 Hansheng Xue , Jiajie Peng , Xuequn Shang
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