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Plant breeding programs use data obtained from multi-environment selection experiments to produce improved varieties with the ultimate aim of maintaining high levels of genetic gain. Selection accuracy can be improved with the use of…

Methodology · Statistics 2026-05-13 Brian R Cullis , Alison B Smith , David GD Hughes , David Butler

A fast algorithm for the approximation of a low rank LU decomposition is presented. In order to achieve a low complexity, the algorithm uses sparse random projections combined with FFT-based random projections. The asymptotic approximation…

Numerical Analysis · Mathematics 2016-01-19 Yariv Aizenbud , Gil Shabat , Amir Averbuch

Mapper, a topological algorithm, is frequently used as an exploratory tool to build a graphical representation of data. This representation can help to gain a better understanding of the intrinsic shape of high-dimensional genomic data and…

Genomics · Quantitative Biology 2023-07-19 Erik J. Amézquita , Farzana Nasrin , Kathleen M. Storey , Masato Yoshizawa

The paper represents an algorithm for planning safe and optimal routes for transport facilities with unrestricted movement direction that travel within areas with obstacles. Paper explains the algorithm using a ship as an example of such a…

Neural and Evolutionary Computing · Computer Science 2019-05-15 Ivan Yanchin , Oleg Petrov

Black-box global optimization aims at minimizing an objective function whose analytical form is not known. To do so, many state-of-the-art methods rely on sampling-based strategies, where sampling distributions are built in an iterative…

Optimization and Control · Mathematics 2024-09-30 Thomas Guilmeau , Emilie Chouzenoux , Víctor Elvira

Genetic Algorithms (GA) are a class of metaheuristic global optimization methods inspired by the process of natural selection among individuals in a population. Despite their widespread use, a comprehensive theoretical analysis of these…

Optimization and Control · Mathematics 2025-02-24 Giacomo Borghi , Lorenzo Pareschi

A method to design gratings in integrated photonics, is presented. The method is based on a transfer matrix formalism enhanced by Finite Element Method (FEM) parameter calculations. The main advantages of the proposed technique are the easy…

Optics · Physics 2021-06-14 Clara Zaccaria , Mattia Mancinelli , Lorenzo Pavesi

Evolutionary Algorithms (EAs) are often challenging to apply in real-world settings since evolutionary computations involve a large number of evaluations of a typically expensive fitness function. For example, an evaluation could involve…

Neural and Evolutionary Computing · Computer Science 2024-04-08 Mohammed Ghaith Altarabichi , Sławomir Nowaczyk , Sepideh Pashami , Peyman Sheikholharam Mashhadi

One of the main limitations of utilizing optimal wavefront shaping in imaging and authentication applications is the slow speed of the optimization algorithms currently being used. To address this problem we develop a micro-genetic…

Death has long been overlooked in evolutionary algorithms. Recent research has shown that death (when applied properly) can benefit the overall fitness of a population and can outperform sub-sections of a population that are "immortal" when…

Neural and Evolutionary Computing · Computer Science 2021-09-29 Micah Burkhardt , Roman V. Yampolskiy

The numerical approximation of high-dimensional evolution equations poses significant computational challenges, particularly in kinetic theory and radiative transfer. In this work, we introduce the Galerkin Alternating Projection (GAP)…

Numerical Analysis · Mathematics 2025-05-27 Gianluca Ceruti , Nicolas Crouseilles , Lukas Einkemmer

This paper proposes a novel mission planning algorithm for autonomous robots that selects an optimal waypoint sequence from a predefined set to maximize total reward while satisfying obstacle avoidance, state, input, derivative, mission…

Robotics · Computer Science 2025-05-07 Jose D. Hoyos , Tianyu Zhou , Zehui Lu , Shaoshuai Mou

The increasing demand for high-speed and reliable wireless networks has driven advancements in technologies such as millimeter-wave and 5G radios, which requires efficient planning and timely deployment of wireless access points. A critical…

Networking and Internet Architecture · Computer Science 2025-01-14 Xuanhao Luo , Zhizhen Li , Zhiyuan Peng , Mingzhe Chen , Yuchen Liu

We present a Bayesian approach to identify optimal transformations that map model input points to low dimensional latent variables. The "projection" mapping consists of an orthonormal matrix that is considered a priori unknown and needs to…

Machine Learning · Statistics 2021-09-22 Panagiotis Tsilifis , Piyush Pandita , Sayan Ghosh , Valeria Andreoli , Thomas Vandeputte , Liping Wang

Some real-world problems revolve to solve the optimization problem \max_{x\in\mathcal{X}}f\left(x\right) where f\left(.\right) is a black-box function and X might be the set of non-vectorial objects (e.g., distributions) where we can only…

Machine Learning · Computer Science 2017-09-20 Trung Le , Khanh Nguyen , Tu Dinh Nguyen , Dinh Phung

Recently, there has been a resurgence of interest in rigorous algorithms for the inference of cancer progression from genomic data. The motivations are manifold: (i) growing NGS and single cell data from cancer patients, (ii) need for novel…

Machine Learning · Computer Science 2016-02-25 Daniele Ramazzotti

Sparse representation of astronomical images is discussed. It is shown that a significant gain in sparsity is achieved when particular mixed dictionaries are used for approximating these types of images with greedy selection strategies.…

Mathematical Physics · Physics 2015-06-11 Laura Rebollo-Neira , James Bowley

We propose a framework for synthesis of geological images based on an exemplar image. We synthesize new realizations such that the discrepancy in the patch distribution between the realizations and the exemplar image is minimized. Such…

Machine Learning · Statistics 2018-09-24 Shing Chan , Ahmed H. Elsheikh

An implementation and an application of the combination of the genetic algorithm and Newton's method for solving a system of nonlinear equations is presented. The method first uses the advantage of the robustness of the genetic algorithm…

Numerical Analysis · Mathematics 2020-07-13 Ryuji Koshikawa , Akira Terui , Masahiko Mikawa

I have developed a procedure utilizing a Genetic-Algorithm-based optimization scheme to fit the observed light curves of an eclipsing binary star with a model produced by the Wilson-Devinney code. The principal advantages of this approach…

Astrophysics · Physics 2009-10-31 Travis S. Metcalfe