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It is important that a spatial network's construction algorithm reproduces the structural properties of the original physical embedding. Here, we assess the Delaunay triangulation as a spatial network construction algorithm for seven…

Statistical Mechanics · Physics 2025-04-02 Eli Newby , Wenlong Shi , Yang Jiao , Salvatore Torquato , Réka Albert

Moir\'e superlattices in twisted two-dimensional materials have generated tremendous excitement as a platform for achieving quantum properties on demand. However, the moir\'e pattern is highly sensitive to the interlayer atomic registry,…

Two-dimensional (2D) materials have been a central focus of recent research because they host a variety of properties, making them attractive both for fundamental science and for applications. It is thus crucial to be able to identify…

Materials Science · Physics 2022-11-18 Mohammad Tohidi Vahdat , Kumar Agrawal Varoon , Giovanni Pizzi

In quantum gas microscopy experiments, reconstructing the site-resolved lattice occupation with high fidelity is essential for the accurate extraction of physical observables. For short interatomic separations and limited signal-to-noise…

Moir\'e superlattice in two-dimensional (2D) materials provides a powerful platform to engineer emergent electronic states, yet the construction of moir\'e superlattices remains lab-scale, involving much trial and error and with little…

This paper is concerned with function reconstruction from samples. The sampling points used in several approaches are (1) structured points connected with fast algorithms or (2) unstructured points coming from, e.g., an initial random draw…

Numerical Analysis · Mathematics 2023-06-07 Felix Bartel , Lutz Kämmerer , Daniel Potts , Tino Ullrich

The most widely used method for obtaining high-quality two-dimensional materials is through mechanical exfoliation of bulk crystals. Manual identification of suitable flakes from the resulting random distribution of crystal thicknesses and…

Understanding structure-property relationships in complex materials requires integrating complementary measurements across multiple length scales. Here we propose an interpretable "multimodal" machine learning framework that unifies…

Materials Science · Physics 2026-02-03 Shun Muroga , Hideaki Nakajima , Taiyo Shimizu , Kazufumi Kobashi , Kenji Hata

Protein design is the inverse approach of the three-dimensional (3D) structure prediction for elucidating the relationship between the 3D structures and amino acid sequences. In general, the computation of the protein design involves a…

Biological Physics · Physics 2021-07-14 Tomoei Takahashi , George Chikenji , Kei Tokita

In this paper, we will introduce a new heterogeneous fast multipole method (H-FMM) for 2-D Helmholtz equation in layered media. To illustrate the main algorithm ideas, we focus on the case of two and three layers in this work. The key…

Numerical Analysis · Mathematics 2018-07-04 Min Hyung Cho , Jingfang Huang , Dangxing Chen , Wei Cai

This paper presents a regularized regression model with a two-level structural sparsity penalty applied to locate individual atoms in a noisy scanning transmission electron microscopy image (STEM). In crystals, the locations of atoms is…

Applications · Statistics 2018-03-13 Xin Li , Alex Belianinov , Ondrej Dyck , Stephen Jesse , Chiwoo Park

The microstructure analyses of porous media have considerable research value for the study of macroscopic properties. As the premise of conducting these analyses, the accurate reconstruction of microstructure digital model is also an…

Image and Video Processing · Electrical Eng. & Systems 2023-04-26 Zhenchuan Ma , Xiaohai He , Pengcheng Yan , Fan Zhang , Qizhi Teng

In this paper, a new data-driven multiscale material modeling method, which we refer to as deep material network, is developed based on mechanistic homogenization theory of representative volume element (RVE) and advanced machine learning…

Computational Engineering, Finance, and Science · Computer Science 2019-01-04 Zeliang Liu , C. T. Wu , M. Koishi

Multicategory lattice data arise in a wide variety of disciplines such as image analysis, biology, and forestry. We consider modeling such data with the automultinomial model, which can be viewed as a natural extension of the autologistic…

Other Statistics · Statistics 2026-02-13 Maria Paula Duenas-Herrera , Stephen Berg , Murali Haran

We consider a generic representation problem of internal coordinates (bond lengths, valence angles, and dihedral angles) and their transformation to 3-dimensional Cartesian coordinates of a biomolecule. We show that the…

Multiscale techniques have been widely shown to potentially overcome the limitation of homogenization schemes in representing the microscopic failure mechanisms in heterogeneous media as well as their influence on their structural response…

Numerical Analysis · Mathematics 2021-08-10 Fabrizio Greco , Lorenzo Leonetti , Paolo Lonetti , Raimondo Luciano , Andrea Pranno

A robust algorithm is proposed to reconstruct the spatial support and the Lam\'e parameters of multiple inclusions in a homogeneous background elastic material using a few measurements of the displacement field over a finite collection of…

Numerical Analysis · Mathematics 2017-02-27 Jaejun Yoo , Younghoon Jung , Mikyoung Lim , Jong Chul Ye , Abdul Wahab

We introduce a general tensor model suitable for data analytic tasks for {\em heterogeneous} datasets, wherein there are joint low-rank structures within groups of observations, but also discriminative structures across different groups. To…

Machine Learning · Statistics 2022-10-04 Davoud Ataee Tarzanagh , George Michailidis

Super-resolution reconstruction techniques entail the utilization of software algorithms to transform one or more sets of low-resolution images captured from the same scene into high-resolution images. In recent years, considerable…

Computer Vision and Pattern Recognition · Computer Science 2024-08-02 Hao Yan , Zixiang Wang , Zhengjia Xu , Zhuoyue Wang , Zhizhong Wu , Ranran Lyu

We present a new algorithm for the design of the connection region between different lattice materials. We solve a Stokes-type topology optimization problem on a narrow morphing region to smoothly connect two different unit cells. The…

Computational Engineering, Finance, and Science · Computer Science 2022-06-03 Nicola Ferro , Simona Perotto , Matteo Gavazzoni