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Gastrulation, namely cell internalization, is a significant milestone during the development of metazoans from worm to human, which generates multiple embryonic layers with distinct cell fates and spatial organizations. Although many…

Cell Behavior · Quantitative Biology 2022-01-17 Jiao Miao , Guoye Guan , Chao Tang

We introduce a novel co-design method for autonomous moving agents' shape attributes and locomotion by combining deep reinforcement learning and evolution with user control. Our main inspiration comes from evolution, which has led to wide…

Artificial Intelligence · Computer Science 2022-05-24 Zhiquan Wang , Bedrich Benes , Ahmed H. Qureshi , Christos Mousas

Deploying motile nanosized particles, also known as ``nanobots'', in the human body promises to improve selectivity in drug delivery and reduce side effects. We consider a swarm of nanobots locating a single cancerous region and treating it…

Multiagent Systems · Computer Science 2025-07-17 Noble Harasha , Cristina Gava , Nancy Lynch , Claudia Contini , Frederik Mallmann-Trenn

Evolutionary multi-objective optimization (EMO) algorithms have been demonstrated to be effective in solving multi-criteria decision-making problems. In real-world applications, analysts often employ several algorithms concurrently and…

Neural and Evolutionary Computing · Computer Science 2024-08-09 Yansong Huang , Zherui Zhang , Ao Jiao , Yuxin Ma , Ran Cheng

Micro-Actions (MAs) are an important form of non-verbal communication in social interactions, with potential applications in human emotional analysis. However, existing methods in Micro-Action Recognition often overlook the inherent subtle…

Computer Vision and Pattern Recognition · Computer Science 2025-12-01 Jihao Gu , Kun Li , Fei Wang , Yanyan Wei , Zhiliang Wu , Hehe Fan , Meng Wang

We consider a simple setting in neuroevolution where an evolutionary algorithm optimizes the weights and activation functions of a simple artificial neural network. We then define simple example functions to be learned by the network and…

Neural and Evolutionary Computing · Computer Science 2023-10-17 Paul Fischer , Emil Lundt Larsen , Carsten Witt

The need for effective biomonitoring in wastewater has become clear due to the impracticality of continuously tracking all chemicals and emerging contaminants in the aquatic exposome. Effect-based biomonitoring provides a cost-effective…

Quantitative Methods · Quantitative Biology 2025-11-27 George Ruck , Jean-Baptiste Aubin , Alexandre Delétang , Didier Neuzeret , Olivier Geffard , Arnaud Chaumot

We present TTCF4LAMMPS, a toolkit for performing non-equilibrium molecular dynamics (NEMD) simulations to study fluid behaviour at low shear rates using the LAMMPS software. By combining direct NEMD simulations and the transient-time…

Soft Condensed Matter · Physics 2023-12-07 Luca Maffioli , James P. Ewen , Edward R. Smith , Sleeba Varghese , Peter J. Daivis , Daniele Dini , B. D. Todd

Stick insect stepping patterns have been studied for insights about locomotor rhythm generation and control, because the underlying neural system is relatively accessible experimentally and produces a variety of rhythmic outputs. Harnessing…

Neurons and Cognition · Quantitative Biology 2025-04-17 Zahra Aminzare , Jonathan E. Rubin

When executing whole-body motions, humans are able to use a large variety of support poses which not only utilize the feet, but also hands, knees and elbows to enhance stability. While there are many works analyzing the transitions involved…

Robotics · Computer Science 2015-10-01 Christian Mandery , Júlia Borràs , Mirjam Jöchner , Tamim Asfour

Object tracking is an important functionality of edge video analytic systems and services. Multi-object tracking (MOT) detects the moving objects and tracks their locations frame by frame as real scenes are being captured into a video.…

Computer Vision and Pattern Recognition · Computer Science 2023-09-07 Sanjana Vijay Ganesh , Yanzhao Wu , Gaowen Liu , Ramana Kompella , Ling Liu

Analyzing the motion of multiple biological agents, be it cells or individual animals, is pivotal for the understanding of complex collective behaviors. With the advent of advanced microscopy, detailed images of complex tissue formations…

Biological Physics · Physics 2024-11-19 Masahito Uwamichi , Simon K. Schnyder , Tetsuya J. Kobayashi , Satoshi Sawai

We demonstrate the merits of using a neuromorphic, or event-based camera (EBC), for tracking of both passive and active matter. For passive matter, we tracked the Brownian motion of different micro-particles and estimated their diffusion…

Traditional approaches to classify the political bias of news articles have failed to generate accurate, generalizable results. Existing networks premised on CNNs and DNNs lack a model to identify and extrapolate subtle indicators of bias…

Neural and Evolutionary Computing · Computer Science 2022-07-27 Agastya Sridharan , Natarajan S

Proteins move and deform to ensure their biological functions. Despite significant progress in protein structure prediction, approximating conformational ensembles at physiological conditions remains a fundamental open problem. This paper…

Biomolecules · Quantitative Biology 2025-04-07 Valentin Lombard , Sergei Grudinin , Elodie Laine

We present a pipeline for searching for trans-Neptunian objects (TNOs) using data from the TESS mission, that includes a novel optimization-based framework for subtracting the effects of scattered light and pointing jitter. The background…

Earth and Planetary Astrophysics · Physics 2022-09-21 Varun Ganapathi

Liquid chromatography with tandem mass spectrometry (LC-MS/MS) based proteomics is a well-established research field with major applications such as identification of disease biomarkers, drug discovery, drug design and development. In…

Quantitative Methods · Quantitative Biology 2018-01-08 Fatema Tuz Zohora , Ngoc Hieu Tran , Xianglilan Zhang , Lei Xin , Baozhen Shan , Ming Li

Muons and other ionizing radiation produced by cosmic rays and radiative decays affect CMOS/CCD sensor. When particles colliding with sensors atoms cause specific kind of noise on images recorded by cameras. We present a concept and…

The physics of behavior seeks simple descriptions of animal behavior. The field has advanced rapidly by using techniques in low dimensional dynamics distilled from computer vision. Yet, we still do not generally understand the rules which…

Biological Physics · Physics 2021-07-08 Matthew S. Bull , Manu Prakash

Graph spectral analysis can yield meaningful embeddings of graphs by providing insight into distributed features not directly accessible in nodal domain. Recent efforts in graph signal processing have proposed new decompositions-e.g., based…

Machine Learning · Computer Science 2019-03-07 Miljan Petrović , Thomas A. W. Bolton , Maria Giulia Preti , Raphaël Liégeois , Dimitri Van De Ville