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Many drug delivery systems suffer from undesirable interactions with the host immune system. It has been experimentally established that covalent attachment (irreversible adsorption) of suitable macromolecules to the surface of the drug…

Biological Physics · Physics 2007-05-23 Radek Erban , Jonathan Chapman , Kerry D. Fisher , Ioannis G. Kevrekidis , Leonard W. Seymour

Presenting systems of differential equations in the form of diagrams has become common in certain parts of physics, especially electromagnetism and computational physics. In this work, we aim to put such use of diagrams on a firm…

Mathematical Physics · Physics 2022-06-20 Evan Patterson , Andrew Baas , Timothy Hosgood , James Fairbanks

We study the response of one dimensional diffusive systems, consisting of particles interacting via symmetric or asymmetric exclusion, to time-periodic driving from two reservoirs coupled to the ends. The dynamical response of the system…

Statistical Mechanics · Physics 2011-03-23 Urna Basu , Debasish Chaudhuri , P. K. Mohanty

The derivation of linear response theory within polarizable embedding is carried out from a rigorous quantum-mechanical treatment of a composite system. Two different subsystem decompositions (symmetric and nonsymmetric) of the linear…

Chemical Physics · Physics 2017-10-09 Nanna Holmgaard List , Patrick Norman , Jacob Kongsted , Hans Jørgen Aagaard Jensen

In many inverse problems, model parameters cannot be precisely determined from observational data. Bayesian inference provides a mechanism for capturing the resulting parameter uncertainty, but typically at a high computational cost. This…

Computation · Statistics 2019-03-28 Matthew Parno , Tarek Moselhy , Youssef Marzouk

The analysis of observable phenomena (for instance, in biology or physics) allows the detection of dynamical behaviors and, conversely, starting from a desired behavior allows the design of objects exhibiting that behavior in engineering.…

Discrete Mathematics · Computer Science 2026-04-10 Antonio E. Porreca , Marius Rolland

We investigate the existence of weak solutions to a multi-component system, consisting of compressible chemically reacting components, coupled with the compressible Stokes equation for the velocity. Specifically, we consider the case of…

Analysis of PDEs · Mathematics 2025-08-26 Piotr B. Mucha , Sarka Necasova , Maja Szlenk

As the use and diversity of diagrams across many disciplines grows, there is an increasing interest in the diagrams research community concerning how such diversity might be documented and explained. In this article, we argue that one way…

Computation and Language · Computer Science 2022-06-14 Tuomo Hiippala , John A. Bateman

A formal derivation of linear hydrodynamics for a granular fluid is given. The linear response to small spatial perturbations of the homogeneous reference state is studied in detail using methods of non-equilibrium statistical mechanics. A…

Statistical Mechanics · Physics 2007-05-23 James W. Dufty , Aparna Baskaran , J. Javier Brey

We treat the problem of characterizing in a systematic way the qualitative features of two-dimensional dynamical systems. To that end, we construct a representation of the topological features of phase portraits by means of diagrams that…

Chaotic Dynamics · Physics 2018-06-29 Javier Roulet , Gabriel B. Mindlin

Statistical mechanics explains the properties of macroscopic phenomena based on the movements of microscopic particles such as atoms and molecules. Movements of microscopic particles can be represented by large-scale interacting systems. In…

Probability · Mathematics 2026-04-15 Kenichi Bannai , Jun Koriki , Makiko Sasada , Hidetada Wachi , Shuji Yamamoto

Many physical systems--from mechanical lattices and electrical circuits to biological tissues and architected metamaterials--can be understood as networks transmitting physical quantities. We present a unified mathematical framework for…

Soft Condensed Matter · Physics 2025-08-07 José M. Ortiz-Tavárez , William Stephenson , Xiaoming Mao

We study general linear transport-reaction systems on an arbitrary dimensional hypercube with periodic boundary conditions. Transport-reaction systems are often used to model the finite speed movement and interaction of particles, bacteria…

Analysis of PDEs · Mathematics 2022-10-04 Benedikt Geiger

A broad class of systems, including ecological, epidemiological, and sociological ones, are characterized by populations of individuals assigned to specific categories, e.g., a chemical species, an opinion or an epidemic state, that are…

Statistical Mechanics · Physics 2025-07-17 Giorgio Vittorio Visco , Johannes Nauta , Tomas Scagliarini , Oriol Artime , Manlio De Domenico

Multiscale techniques have been widely shown to potentially overcome the limitation of homogenization schemes in representing the microscopic failure mechanisms in heterogeneous media as well as their influence on their structural response…

Numerical Analysis · Mathematics 2021-08-10 Fabrizio Greco , Lorenzo Leonetti , Paolo Lonetti , Raimondo Luciano , Andrea Pranno

In this paper, we extend our study of mass transport in multicomponent isothermal fluids to the incompressible case. For a mixture, incompressibility is defined as the independence of average volume on pressure, and a weighted sum of the…

Analysis of PDEs · Mathematics 2020-05-26 Dieter Bothe , Pierre-Etienne Druet

This paper offers a method of obtaining constitutive equations for rheological medium. The method has been developed using the symbolic diagram illustrating the behavior of incompressible material. The studied medium operates under finite…

Materials Science · Physics 2007-05-23 Alexander L. Svistkov , Oksana A. Putilova

Complex natural or engineered systems comprise multiple characteristic scales, multiple spatiotemporal domains, and even multiple physical closure laws. To address such challenges, we introduce an interface learning paradigm and put forth a…

Computational Physics · Physics 2020-11-18 Shady E. Ahmed , Omer San , Kursat Kara , Rami Younis , Adil Rasheed

Condensed ionic systems are described in the framework of a combined approach that takes into account both long-range and short-range interactions. Short-range interaction is expressed in terms of mean potentials and long-range interaction…

Statistical Mechanics · Physics 2019-10-03 G. Bokun , I. Kravtsiv , M. Holovko , V. Vikhrenko , D. di Caprio

In this paper we present a self-contained macroscopic description of diffusive systems interacting with boundary reservoirs and under the action of external fields. The approach is based on simple postulates which are suggested by a wide…

Statistical Mechanics · Physics 2015-12-18 L. Bertini , A. De Sole , D. Gabrielli , G. Jona-Lasinio , C. Landim
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