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We study the dynamics of phenotypically structured populations in environments with fluctuations. In particular, using novel arguments from the theories of Hamilton-Jacobi equations with constraints and homogenization, we obtain results…

Analysis of PDEs · Mathematics 2013-06-04 Sepideh Mirrahimi , Benoit Perthame , Panagiotis E. Souganidis

Mating preferences of many biological species are not constant but season-dependent. Within the framework of evolutionary game theory this can be modeled with two finite opposite-sex populations playing against each other following the…

Populations and Evolution · Quantitative Biology 2015-08-13 Olena Tkachenko , Juzar Thingna , Sergey Denisov , Vasily Zaburdaev , Peter Hänggi

We analyze the population dynamics of a broad class of fitness functions that exhibit epochal evolution---a dynamical behavior, commonly observed in both natural and artificial evolutionary processes, in which long periods of stasis in an…

adap-org · Physics 2007-05-23 James P. Crutchfield , Erik van Nimwegen

The probability that the frequency of a particular trait will eventually become unity, the so-called fixation probability, is a central issue in the study of population evolution. Its computation, once we are given a stochastic finite…

Populations and Evolution · Quantitative Biology 2018-11-22 Fabio A. C. C. Chalub , Max O. Souza

Biological fitness is not an observable quantity and must be inferred from population dynamics. Bayesian inference applied to the Moran process and variants yields a robust inference method that can infer fitness in populations evolving via…

Dynamical Systems · Mathematics 2013-10-24 Marc Harper

In evolutionary dynamics, well-mixed populations are almost always associated with all-to-all interactions; mathematical models are based on complete graphs. In most cases, these models do not predict fixation probabilities in groups of…

Populations and Evolution · Quantitative Biology 2024-02-28 Francisco Herrerías-Azcué , Vicente Pérez-Muñuzuri , Tobias Galla

We study large fluctuations in evolutionary games belonging to the coordination and anti-coordination classes. The dynamics of these games, modeling cooperation dilemmas, is characterized by a coexistence fixed point separating two…

Populations and Evolution · Quantitative Biology 2015-05-19 Michael Assaf , Mauro Mobilia

A simple analytical framework to study the molecular quasispecies evolution of finite populations is proposed, in which the population is assumed to be a random combination of the constiyuent molecules in each generation,i.e., linkage…

Statistical Mechanics · Physics 2016-08-31 Domingos Alves , J. F. Fontanari

We study an ecology-inspired model for a population of bounded size, whose dynamics is governed by random birth, death, and immigration events. Stochastic fluctuations in the number of individuals give rise to a succession of alternating…

Populations and Evolution · Quantitative Biology 2026-05-27 Lucas M. Brugevin , Damián H. Zanette

We investigate the evolutionary dynamics of a finite population of RNA sequences adapting to a neutral fitness landscape. Despite the lack of differential fitness between viable sequences, we observe typical properties of adaptive…

Populations and Evolution · Quantitative Biology 2007-05-23 Robert Forster , Christoph Adami , Claus O. Wilke

The adaptive evolution of large asexual populations is generally characterized by competition between clones carrying different beneficial mutations. This interference phenomenon slows down the adaptation speed and makes the theoretical…

Populations and Evolution · Quantitative Biology 2012-12-20 Maria Rita Fumagalli , Matteo Osella , Philippe Thomen , Francois Heslot , Marco Cosentino Lagomarsino

We study a complementarity game as a systematic tool for the investigation of the interplay between individual optimization and population effects and for the comparison of different strategy and learning schemes. The game randomly pairs…

Populations and Evolution · Quantitative Biology 2010-11-17 Juergen Jost , Wei Li

The paper presents a method by which the mean field dynamics of a population of dynamical systems with parameter diversity and global coupling can be described in terms of a few macroscopic degrees of freedom. The method applies to…

Statistical Mechanics · Physics 2009-11-07 Silvia De Monte , Francesco d'Ovidio , Erik Mosekilde

Epochal dynamics, in which long periods of stasis in an evolving population are punctuated by a sudden burst of change, is a common behavior in both natural and artificial evolutionary processes. We analyze the population dynamics for a…

adap-org · Physics 2007-05-23 Erik van Nimwegen , James P. Crutchfield

The drift-barrier hypothesis states that random genetic drift constrains the refinement of a phenotype under natural selection. The influence of effective population size and the genome-wide deleterious mutation rate were studied…

Populations and Evolution · Quantitative Biology 2024-07-25 Luis A. La Rocca , Konrad Gerischer , Anton Bovier , Peter M. Krawitz

Frequency-dependent selection reflects the interaction between different species as they battle for limited resources in their environment. In a stochastic evolutionary game the species relative fitnesses guides the evolutionary dynamics…

Probability · Mathematics 2020-12-29 Lea Popovic , Liam Peuckert

We discuss stochastic dynamics of populations of individuals playing games. Our models possess two evolutionarily stable strategies: an efficient one, where a population is in a state with the maximal payoff (fitness) and a risk-dominant…

Populations and Evolution · Quantitative Biology 2007-05-23 Jacek Miekisz

Highly-diverse ecosystems exhibit a broad distribution of population sizes and species turnover, where species at high and low abundances are exchanged over time. We show that these two features generically emerge in the fluctuating phase…

Populations and Evolution · Quantitative Biology 2024-01-09 Thibaut Arnoulx de Pirey , Guy Bunin

Evolution in finite populations is often modelled using the classical Moran process. Over the last ten years this methodology has been extended to structured populations using evolutionary graph theory. An important question in any such…

Populations and Evolution · Quantitative Biology 2015-05-25 Karan Pattni , Mark Broom , Jan Rychtar , Lara J. Silvers

Building upon the eco-evolutionary game dynamics framework established by Tilman et al., we investigate stochastic fluctuations in a two-strategy system incorporating environmental feedback mechanisms, where the payoff matrix exhibits…

Populations and Evolution · Quantitative Biology 2025-12-01 Chao Wang , Minlan Li , Chang Liu