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Related papers: Cardiac Alternans Arising from an Unfolded Border-…

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We discover a new type of nonequilibrium phase transition in a model of chromatin dynamics, which accounts for the coherent motions that have been observed in experiment. The coherent motion is due to the long-range cooperation of molecular…

Soft Condensed Matter · Physics 2023-07-27 Iraj Eshghi , Alexanda Zidovska , Alexander Y. Grosberg

In this report, we consider a semi-infinite discrete nonlinear Schr\"odinger equation driven at one edge by a driving force. The equation models the dynamics of coupled waveguide arrays. When the frequency of the forcing is in the…

Pattern Formation and Solitons · Physics 2008-09-24 H. Susanto

We study the behaviour at tipping points close to (smoothed) non-smooth fold bifurcations in one-dimensional oscillatory forced systems. The focus is the Stommel-Box, and related climate models, which are piecewise-smooth continuous…

Dynamical Systems · Mathematics 2023-05-18 Chris Budd , Rachel Kuske

A novel flow state consisting of two oppositely travelling waves (TWs) with oscillating amplitudes has been found in the counterrotating Taylor-Couette system by full numerical simulations. This structure bifurcates out of axially standing…

Pattern Formation and Solitons · Physics 2008-07-24 A. Pinter , M. Lücke , Ch. Hoffmann

While spiral wave breakup has been implicated in the emergence of atrial fibrillation, its role in maintaining this complex type of cardiac arrhythmia is less clear. We used the Karma model of cardiac excitation to investigate the dynamical…

Tissues and Organs · Quantitative Biology 2017-10-11 Christopher D Marcotte , Roman O Grigoriev

Double Hopf bifurcation analysis can be used to reveal some complicated dynamical behavior in a dynamical system, such as the existence or coexistence of periodic orbits, quasi-periodic orbits, or even chaos. In this paper, an algorithm for…

Dynamical Systems · Mathematics 2018-11-27 Yanfei Du , Ben Niu , Yuxiao Guo , Junjie Wei

Biological evolution has endowed the plant Arabidopsis thaliana with genetically regulated circadian rhythms. A number of authors have published kinetic models for these oscillating chemical reactions based on a network of interacting…

Biological Physics · Physics 2021-09-17 Yian Xu , Masoud Asadi-Zeydabadi , Randall Tagg , Orrin Shindell

An attractor of a piecewise-smooth continuous system of differential equations can bifurcate from a stable equilibrium to a more complicated invariant set when it collides with a switching manifold under parameter variation. Here numerical…

Dynamical Systems · Mathematics 2016-08-24 D. J. W. Simpson

The properties of a front between two different phases in the presence of a smoothly inhomogeneous external field that takes its critical value at the crossing point is analyzed. Two generic scenarios are studied. In the first, the system…

Pattern Formation and Solitons · Physics 2015-08-17 Haim Weissmann , Nadav M. Shnerb , David A. Kessler

Cell monolayers provide an interesting example of active matter, exhibiting a phase transition from a flowing to jammed state as they age. Here we report experiments and numerical simulations illustrating how a jammed cellular layer rapidly…

Jamming crossovers occur at zero temperature in assemblies of particles interacting via finite range repulsive potentials, when on increasing the density particles make contacts with those of subsequent coordination shells. Density…

Soft Condensed Matter · Physics 2013-09-03 Massimo Pica Ciamarra , Peter Sollich

Spatially discordant alternans (SDA) play a crucial role in cardiac arrhythmogenesis by creating steep repolarization gradients facilitating conduction block and reentry. While traditionally studied using electrical indicators, this work…

One-dimensional non-equilibrium models of particles subjected to a coagulation-diffusion process are important in understanding non-equilibrium dynamics, and fluctuation-dissipation relation. We consider in this paper transport properties…

Statistical Mechanics · Physics 2015-06-18 Jean-Yves Fortin

The border-collision normal form is a piecewise-linear family of continuous maps that describe the dynamics near border-collision bifurcations. Most prior studies assume each piece of the normal form is invertible, as is generic from an…

Dynamical Systems · Mathematics 2024-08-12 David J. W. Simpson

Transport in a one-dimensional symmetric device can be activated by the combination of thermal noise and a bi-harmonic drive. For the study case of an overdamped Brownian particle diffusing on a periodic one-dimensional substrate, we…

Statistical Mechanics · Physics 2009-11-11 M. Borromeo , F. Marchesoni

Triadic interactions are the fundamental mechanism of energy transfer in fluid flows. This work introduces bispectral mode decomposition as a direct means of educing flow structures that are associated with triadic interactions from…

Fluid Dynamics · Physics 2021-01-20 Oliver T. Schmidt

Athermal systems across a large range of length scales, ranging from foams and granular bead packings to crumpled metallic sheets, exhibit slow stress relaxation when compressed. Experimentally they show a non-monotonic stress response when…

Soft Condensed Matter · Physics 2021-12-07 Rituparno Mandal , Diego Tapias , Peter Sollich

We have designed 3D numerical simulations of a soft spheres model, with size polidispersity and in athermal conditions, to study the transient shear banding that occurs during yielding of jammed soft solids. We analyze the effects of…

Soft Condensed Matter · Physics 2020-07-15 Vishwas V. Vasisht , Emanuela Del Gado

In this paper, we present a cell motility model that takes into account the cell membrane effect. The model introduced is an incompressible Darcy free boundary problem. This model involves a nonlinear term in the boundary condition to model…

Analysis of PDEs · Mathematics 2025-01-09 Claire Alamichel , Nicolas Meunier

The folded node is a singularity associated with loss of normal hyperbolicity in systems where mixtures of slow and fast timescales arise due to singular perturbations. Canards are special solutions that reveal a counteractive feature of…

Dynamical Systems · Mathematics 2015-06-03 Mathieu Desroches , Mike R. Jeffrey