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Biological neurons exhibit remarkable intelligence: they maintain internal states, communicate selectively with other neurons, and self-organize into complex graphs rather than rigid hierarchical layers. What if artificial intelligence…

Machine Learning · Computer Science 2025-12-01 Antoine Salomon

Some common systems modelling and simulation approaches for immune problems are Monte Carlo simulations, system dynamics, discrete-event simulation and agent-based simulation. These methods, however, are still not widely adopted in…

Computational Engineering, Finance, and Science · Computer Science 2013-07-09 Grazziela P. Figueredo , Peer-Olaf Siebers , Uwe Aickelin , Stephanie Foan

It appeared recently that the classical random graph model used to represent real-world complex networks does not capture their main properties. Since then, various attempts have been made to provide accurate models. We study here a model…

Statistical Mechanics · Physics 2021-03-22 Jean-Loup Guillaume , Matthieu Latapy

Complex networks have established themselves along the last years as being particularly suitable and flexible for representing and modeling several complex natural and human-made systems. At the same time in which the structural intricacies…

Computational Physics · Physics 2007-09-19 Luis Enrique Correa da Rocha , Luciano da Fontoura Costa

The major biochemical networks of the living cell, the network of interacting genes and the network of biochemical reactions, are highly interdependent, however, they have been studied mostly as separate systems so far. In the last years an…

Molecular Networks · Quantitative Biology 2017-11-01 David F. Klosik , Anne Grimbs , Stefan Bornholdt , Marc-Thorsten Hütt

The paper deals with the spread of two competing viruses over a network of population nodes, accounting for pairwise interactions and higher-order interactions (HOI) within and between the population nodes. We study the competitive…

Systems and Control · Electrical Eng. & Systems 2023-09-26 Sebin Gracy , Brian D. O. Anderson , Mengbin Ye , Cesar A. Uribe

A mathematical model for the quantitative analysis of cancer immune interaction, considering the role of antibodies has been proposed in this paper. The model is based on the clinical evidence, which states that antibodies can directly kill…

Quantitative Methods · Quantitative Biology 2016-10-19 Shiferaw Feyissa , Sandip Banerjee

The history of infections and epidemics holds famous examples where understanding, containing and ultimately treating an outbreak began with understanding its mode of spread. Influenza, HIV and most computer viruses, spread person to…

Social and Information Networks · Computer Science 2013-09-26 Chris Milling , Constantine Caramanis , Shie Mannor , Sanjay Shakkottai

This study extends the SIS epidemic model for single virus propagation over an arbitrary graph to an SI1SI2S epidemic model of two exclusive, competitive viruses over a two-layer network with generic structure, where network layers…

Physics and Society · Physics 2013-09-02 Faryad Darabi Sahneh , Caterina Scoglio

Understanding spreading dynamics will benefit society as a whole in better preventing and controlling diseases, as well as facilitating the socially responsible information while depressing destructive rumors. In network-based spreading…

Physics and Society · Physics 2015-01-16 Ai-Xiang Cui , Zimo Yang , Tao Zhou

When an unprecedented infectious disease with high mortality and transmissibility emerges, immediate usage of vaccines or medicines is hardly available. Thus, many health authorities rely on non-pharmaceutical interventions through…

Physics and Society · Physics 2022-01-21 Minsuk Kim , Soon-Hyung Yook

This paper deals with the statistical signal pro- cessing over graphs for tracking infection diffusion in social networks. Infection (or Information) diffusion is modeled using the Susceptible-Infected-Susceptible (SIS) model. Mean field…

Social and Information Networks · Computer Science 2016-11-01 Vikram Krishnamurthy , Sujay Bhatt , Tavis Pedersen

The purpose of this article is to introduce a new iterative algorithm with properties resembling real life bipartite graphs. The algorithm enables us to generate wide range of random bigraphs, which features are determined by a set of…

Artificial Intelligence · Computer Science 2010-11-03 Szymon Chojnacki , Mieczysław Kłopotek

Although community structure is ubiquitous in complex networks, few works exploit this topological property to control epidemics. In this work, devoted to networks with non-overlapping community structure (i.e, a node belongs to a single…

Social and Information Networks · Computer Science 2018-06-15 Zakariya Ghalmane , Mohammed El Hassouni , Hocine Cherifi

The phenomenon of oral tolerance refers to a local and systemic state of tolerance, induced in the gut associated lymphoid tissues, after its exposure to innocuous antigens, such as food proteins. While recent findings shed light in the…

Molecular Networks · Quantitative Biology 2013-11-14 Pedro J. Miranda , Murilo Delgobo , Giovanni M. Favero , Kátia S. Paludo , Murilo S. Baptista , Sandro E. de S. Pinto

An improved version of the symmetrical immune network theory is presented, in which killing is ascribed to IgM antibodies, while IgG antibodies are stimulatory. A recurring theme in the symmetrical network theory is the concept of…

Adaptation and Self-Organizing Systems · Physics 2010-04-29 Geoffrey W. Hoffmann

Populations of heterogeneous cells play an important role in many biological systems. In this paper we consider systems where each cell can be modelled by an ordinary differential equation. To account for heterogeneity, parameter values are…

Quantitative Methods · Quantitative Biology 2009-09-27 Steffen Waldherr , Jan Hasenauer , Frank Allgöwer

A cell's behavior is a consequence of the complex interactions between its numerous constituents, such as DNA, RNA, proteins and small molecules. Cells use signaling pathways and regulatory mechanisms to coordinate multiple processes,…

Molecular Networks · Quantitative Biology 2007-09-12 Reka Albert

Understanding how the network topology affects the spread of an epidemic is a main concern in order to develop efficient immunization strategies. While there is a great deal of work dealing with the macroscopic topological properties of the…

Social and Information Networks · Computer Science 2023-01-02 Debayan Chakraborty , Anurag Singh , Hocine Cherifi

We use the susceptible-infected-recovered (SIR) model for disease spread over a network, and empirically study how well various centrality measures perform at identifying which nodes in a network will be the best spreaders of disease on 10…

Social and Information Networks · Computer Science 2012-08-23 Brian Macdonald , Paulo Shakarian , Nicholas Howard , Geoffrey Moores