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Discrete dynamic models are a powerful tool for the understanding and modeling of large biological networks. Although a lot of progress has been made in developing analysis tools for these models, there is still a need to find approaches…

Molecular Networks · Quantitative Biology 2013-06-14 Jorge G. T. Zañudo , Réka Albert

Networks play a central role in modern data analysis, enabling us to reason about systems by studying the relationships between their parts. Most often in network analysis, the edges are given. However, in many systems it is difficult or…

Machine Learning · Statistics 2014-02-06 Scott W. Linderman , Ryan P. Adams

We study the growth of a directed network, in which the growth is constrained by the cost of adding links to the existing nodes. We propose a new preferential-attachment scheme, in which a new node attaches to an existing node i with…

Statistical Mechanics · Physics 2007-05-23 Volkan Sevim , Per Arne Rikvold

We propose a general class of co-evolving tree network models driven by local exploration where new vertices attach to the current network via randomly sampling a vertex and then exploring the graph for a random number of steps in the…

Probability · Mathematics 2024-03-05 Sayan Banerjee , Shankar Bhamidi , Xiangying Huang

Networks provide a skeleton for the spread of contagions, like, information, ideas, behaviors and diseases. Many times networks over which contagions diffuse are unobserved and need to be inferred. Here we apply survival theory to develop…

Social and Information Networks · Computer Science 2013-05-17 Manuel Gomez Rodriguez , Jure Leskovec , Bernhard Schoelkopf

Biochemical networks are used in computational biology, to model the static and dynamical details of systems involved in cell signaling, metabolism, and regulation of gene expression. Parametric and structural uncertainty, as well as…

Molecular Networks · Quantitative Biology 2014-10-15 Ovidiu Radulescu , Alexander N. Gorban , Andrei Zinovyev , Vincent Noel

It was experimentally observed that the majority of real-world networks follow power law degree distribution. The aim of this paper is to study the algorithmic complexity of such "typical" networks. The contribution of this work is twofold.…

Data Structures and Algorithms · Computer Science 2015-07-10 Paweł Brach , Marek Cygan , Jakub Łącki , Piotr Sankowski

In the study of ad hoc sensor networks, clustering plays an important role in energy conservation therefore analyzing the mechanics of such topology can be helpful to make logistic decisions .Using the theory of complex network the…

Networking and Internet Architecture · Computer Science 2014-10-30 Chiranjib Patra , Samiran Chattopadhyay , Matangini Chattopadhyay , Parama Bhaumik

Based on measurements of the Internet topology data, we found out that there are two mechanisms which are necessary for the correct modeling of the Internet topology at the Autonomous Systems (AS) level: the Interactive Growth of new nodes…

Networking and Internet Architecture · Computer Science 2009-09-29 Shi Zhou , Raul J. Mondragon

Inspired by scientific collaboration networks, especially our empirical analysis of the network of econophysicists, an evolutionary model for weighted networks is proposed. Both degree-driven and weight-driven models are considered.…

Disordered Systems and Neural Networks · Physics 2007-05-23 Menghui Li , Jinshan Wu , Dahui Wang , Tao Zhou , Zengru Di , Ying Fan

A network is scale-free if its connectivity density function is proportional to a power-law distribution. Scale-free networks may provide an explanation for the robustness observed in certain physical and biological phenomena, since the…

Molecular Networks · Quantitative Biology 2018-07-03 Peter Clote

A version of ``preferential attachment'' random graphs, corresponding to linear ``weights'' with random ``edge additions,'' which generalizes some previously considered models, is studied. This graph model is embedded in a continuous-time…

Probability · Mathematics 2007-05-23 K. B. Athreya , A. P. Ghosh , S. Sethuraman

We consider a growing network, whose growth algorithm is based on the preferential attachment typical for scale-free constructions, but where the long-range bonds are disadvantaged. Thus, the probability to get connected to a site at…

Statistical Mechanics · Physics 2009-11-07 R. Xulvi-Brunet , I. M. Sokolov

Inspired by empirical data on real world complex networks, the last few years have seen an explosion in proposed generative models to understand and explain observed properties of real world networks, including power law degree distribution…

Probability · Mathematics 2015-08-11 Shankar Bhamidi , Jimmy Jin , Andrew Nobel

This paper deals with the detection and prediction of losses due to cyber attacks waged on vital networks. The accumulation of losses to a network during a series of attacks is modeled by a 2-dimensional monotone random walk process as…

Probability · Mathematics 2019-01-23 Jewgeni H. Dshalalow , Ryan T. White

Preferential attachment is the most popular explanation for the emergence of scaling behavior in the World Wide Web, but this explanation has been challenged by the global information hypothesis, the existence of linear preference and the…

Social and Information Networks · Computer Science 2015-05-27 Bojin Zheng , Jianmin Wang , Guisheng Chen , Jian Jiang , Xianjun Shen

The stability of ecosystems as well as the relation between topology and dynamics on multilayer networks are important questions that are usually discussed in separate communities. Here, we combine these two topics by investigating the…

Populations and Evolution · Quantitative Biology 2015-07-24 Jonas Richhardt , Sebastian Plitzko , Florian Schwarzmüller , Barbara Drossel

Network models with preferential attachment, where new nodes are injected into the network and form links with existing nodes proportional to their current connectivity, have been well studied for some time. Extensions have been introduced…

Physics and Society · Physics 2013-06-26 James P. Bagrow , Dirk Brockmann

We perform an empirical study of the preferential attachment phenomenon in temporal networks and show that on the Web, networks follow a nonlinear preferential attachment model in which the exponent depends on the type of network…

Physics and Society · Physics 2013-03-27 Jérôme Kunegis , Marcel Blattner , Christine Moser

Model Compression has drawn much attention within the deep learning community recently. Compressing a dense neural network offers many advantages including lower computation cost, deployability to devices of limited storage and memories,…

Machine Learning · Computer Science 2024-11-04 Diptarka Saha , Zihe Liu , Feng Liang
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