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We study the flux of totally asymmetric simple exclusion processes (TASEPs) on a twin co-axial square tracks. In this biologically motivated model the particles in each track act as mobile bottlenecks against the movement of the particles…

Statistical Mechanics · Physics 2017-05-30 Sumit Sinha , Debashish Chowdhury

One-dimensional asymmetric simple exclusion processes (ASEPs) which are coupled to external reservoirs via diffusive transport are studied. These ASEPs consist of active compartments characterized by directed movements of the particles and…

Statistical Mechanics · Physics 2007-05-23 Stefan Klumpp , Reinhard Lipowsky

We propose an extension of the totally asymmetric simple exclusion process (TASEP) in which particles hopping along a lattice can be blocked by obstacles that dynamically attach/detach from lattice sites. The model can be thought as TASEP…

Statistical Mechanics · Physics 2019-02-20 Bartlomiej Waclaw , Justyna Cholewa-Waclaw , Philip Greulich

We consider the influence of disorder on the non-equilibrium steady state of a minimal model for intracellular transport. In this model particles move unidirectionally according to the \emph{totally asymmetric exclusion process} (TASEP) and…

Statistical Mechanics · Physics 2007-05-23 P. Pierobon , M. Mobilia , R. Kouyos , E. Frey

We introduce a new model to study the oscillations of opposite flows sharing a common bottleneck and moving on two Totally Asymmetric Simple Exclusion Process (TASEP) lanes. We provide a theoretical analysis of the phase diagram, valid when…

Statistical Mechanics · Physics 2012-06-15 Asja Jelić , Cécile Appert-Rolland , Ludger Santen

Totally asymmetric simple exclusion processes (TASEP) with particles which occupy more than one lattice site and with a local inhomogeneity far away from the boundaries are investigated. These non-equilibrium processes are relevant for the…

Statistical Mechanics · Physics 2009-11-10 Leah B. Shaw , Anatoly B. Kolomeisky , Kelvin H. Lee

A bottleneck can largely deteriorate the flow, such as a traffic light or an on-ramp at a road. To alleviate bottleneck situations, one of the important strategies is to control the input rate to suit the state of the road. In this study,…

Cellular Automata and Lattice Gases · Physics 2019-03-28 Hiroki Yamamoto , Daichi Yanagisawa , Katsuhiro Nishinari

We study the totally asymmetric simple exclusion process (TASEP) on complex networks, as a paradigmatic model for transport subject to excluded volume interactions. Building on TASEP phenomenology on a single segment and borrowing ideas…

Statistical Mechanics · Physics 2011-08-09 I. Neri , N. Kern , A. Parmeggiani

Theoretical advances in the study of non-equilibrium phenomena are briefly reviewed with emphasis on steady state properties of one-dimensional driven lattice gases. The presentation is focused on the totally asymmetric simple-exclusion…

Statistical Mechanics · Physics 2008-03-19 J. G. Brankov , N. C. Pesheva , N. Zh. Bunzarova

We propose a modification to the study of site-wise dynamically disordered totally asymmetric simple exclusion process (TASEP). Motivated by the process of gene transcription, a study in ref. \cite{waclaw2019totally} introduced an extension…

Statistical Mechanics · Physics 2024-05-13 Nikhil Bhatia , Arvind Kumar Gupta

We consider the asymmetric simple exclusion process (TASEP) on open network consisting of three consecutively coupled macroscopic chain segments with a shortcut between the tail of the first segment and the head of the third one. The model…

Biological Physics · Physics 2015-06-18 Nadezhda Bunzarova , Nina Pesheva , Jordan Brankov

Bottlenecks, i.e. local reductions of capacity, are one of the most relevant scenarios of traffic systems. The asymmetric simple exclusion process (ASEP) with a defect is a minimal model for such a bottleneck scenario. One crucial question…

Cellular Automata and Lattice Gases · Physics 2015-12-09 Andreas Schadschneider , Johannes Schmidt , Vladislav Popkov

The totally asymmetric simple exclusion process with generalized update is a version of the discrete time totally asymmetric exclusion process with an additional inter-particle interaction that controls the degree of particle clustering.…

Statistical Mechanics · Physics 2024-03-21 Nadezhda Zh Bunzarova , Nina C Pesheva , Alexander M Povolotsky

Motor protein motion on biopolymers can be described by models related to the totally asymmetric simple exclusion process (TASEP). Inspired by experiments on the motion of kinesin-4 motors on antiparallel microtubule overlaps, we analyze a…

Biological Physics · Physics 2016-09-07 Hui-Shun Kuan , Meredith D. Betterton

We explore the stationary densities in totally asymmetric exclusion processes (TASEP) with open boundary conditions and spatially inhomogeneous hopping rates. We calculate the steady state density profiles that characterise the associated…

Statistical Mechanics · Physics 2024-10-31 Sudip Mukherjee , Abhik basu

The totally asymmetric simple exclusion process (TASEP) is a well studied example of far-from-equilibrium dynamics. Here, we consider a TASEP with open boundaries but impose a global constraint on the total number of particles. In other…

Statistical Mechanics · Physics 2008-07-02 D. A. Adams , B. Schmittmann , R. K. P. Zia

We report here results on the study of the totally asymmetric simple exclusion processes (TASEP), defined on an open network, consisting of head and tail simple chain segments with a double-chain section inserted in-between. Results of…

Statistical Mechanics · Physics 2013-06-19 Nina Pesheva , Jordan Brankov

We study the effects of local inhomogeneities, i.e., slow sites of hopping rate $q<1$, in a totally asymmetric simple exclusion process (TASEP) for particles of size $\ell \geq 1$ (in units of the lattice spacing). We compare the simulation…

Statistical Mechanics · Physics 2008-05-21 J. J. Dong , B. Schmittmann , R. K. P. Zia

We study a totally asymmetric simple exclusion process (TASEP) with one defect site, hopping rate $q<1$, near the system boundary. Regarding our system as a pair of uniform TASEP's coupled through the defect, we study various methods to…

Statistical Mechanics · Physics 2009-11-13 J. J. Dong , R. K. P. Zia , B. Schmittmann

We revisit the defect-induced nonequilibrium phase transition from a largely homogeneous free-flow phase to a phase-separated congested phase in the sublattice totally asymmetric simple exclusion process (TASEP) with local deterministic…

Statistical Mechanics · Physics 2023-06-27 Gunter M. Schütz
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