Related papers: Dynamical Implications of Viral Tiling Theory
The recent measurements of azimuthal single spin asymmetries by the HERMES collaboration has opened up new possibility to measure chiral-odd distribution functions through semi-inclusive deep-inelastic scatterings. Here, predictions are…
We investigate spinodal decomposition kinetics of an initially nematic dispersion of rod-like viruses (fd virus). Quench experiments are performed from a flow-stabilized homogeneous nematic state at high shear rate into the two-phase…
During the lifecycle of many single-stranded RNA viruses, including many human pathogens, a protein shell called the capsid spontaneously assembles around the viral genome. Understanding the mechanisms by which capsid proteins selectively…
During the early developmental process of organisms, the formation of the left-right laterality requires a subtle mechanism, as it is associated with other principal body axes. Any inherent chiral feature in an egg cell can in principal…
The behavior of a colloidal suspension of rod-like {\it fd} viruses in the nematic phase, subjected to steady state and transient shear flows is studied. The monodisperse nature of these rods combined with relatively small textural…
Monodisperse suspensions of rodlike chiral $fd$ viruses are condensed into a rod-length thick colloidal monolayers of aligned rods by depletion forces. Twist deformations of the molecules are expelled to the monolayer edge as in a chiral…
In this paper, we study two classes of planar self-similar fractals $T_\varepsilon$ with a shifting parameter $\varepsilon$. The first one is a class of self-similar tiles by shifting $x$-coordinates of some digits. We give a detailed…
Viroporins are small viral proteins that oligomerize in the membrane of host cells and induce the formation of hydrophilic pores in these membranes, thus altering the physiological properties of the host cells. Due to their significance for…
We study edge fluctuations of a flat colloidal membrane comprised of a monolayer of aligned filamentous viruses. Experiments reveal that a peak in the spectrum of the in-plane edge fluctuations arises for sufficiently strong virus…
The quantum spin hall (QSH) phase, also known as the 2D topological insulator, is characterized by protected helical edge modes arising from time reversal symmetry. While initially proposed for band insulators, this phase can also manifest…
Diffusion-driven patterns appear on curved surfaces in many settings, initiated by unstable modes of an underlying Laplacian operator. On a flat surface or perfect sphere, the patterns are degenerate, reflecting translational/rotational…
The Penrose tiling is directly related to the atomic structure of certain decagonal quasicrystals and, despite its aperiodicity, is highly symmetric. It is known that the numbers 1, $-\tau $, $(-\tau)^2$, $(-\tau)^3$, ..., where $\tau…
We develop the elastic theory for inversion-asymmetric tethered membranes and use it to identify and study their possible phases. Asymmetry in a tethered membrane causes spontaneous curvature, which in general depends upon the local…
Polymeric particles are strong candidates for designing artificial materials capable of emulating the complex twisting-based functionality observed in biological systems. In this letter, we provide the first detailed investigation of the…
Smectic-A monolayers self-assembled in aqueous solutions of chiral fd viruses and a polymer depletant have been shown to exhibit a variety of structures including large, flat disks and twisted ribbons. The virus particles twist near the…
We propose and investigate an extension of the Caspar-Klug symmetry principles for viral capsid assembly to the programmable assembly of size-controlled triply-periodic polyhedra, discrete variants of the Primitive, Diamond, and Gyroid…
We present a novel variant of a planar quasiperiodic tiling with tenfold symmetry, employing the same thick and thin rhombuses as the celebrated rhombic Penrose tiling. Despite its distinct visual appearance, this new tiling shares several…
It is experimentally known that virus exhibits stochastic motion in cytoplasm of a living cell in the free form as well as the form being contained in the endosome and the exponent of anomalous diffusion of the virus fluctuates depending on…
Vertically vibrated rod-shaped granular materials confined to quasi-2D containers self organize into distinct patterns. We find, consistent with theory and simulation, a density dependent isotropic-nematic transition. Along the walls, rods…
The architecture of infinite structures with non-crystallographic symmetries can be modeled via aperiodic tilings, but a systematic construction method for finite structures with non-crystallographic symmetry at different radial levels is…