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Physical properties of materials are seldom studied in the context of packing problems. In this work we study the behavior of semifluids: materials with particular characteristics, that share properties both with solids and with fluids. We…

Data Structures and Algorithms · Computer Science 2016-07-18 João Pedro Pedroso

The initial interaction of water with semiconductors determines the electronic structure of the solid-liquid interface. The exact nature of this interaction is, however, often unknown. Here, we study gallium phosphide-based surfaces exposed…

Materials Science · Physics 2019-05-15 Matthias M. May , Helena Stange , Jonas Weinrich , Thomas Hannappel , Oliver Supplie

Various experimental settings that involve drying solutions or suspensions of nanoparticles -- often called nanofluids -- have recently been used to produce structured nanoparticle layers. In addition to the formation of polygonal networks…

Soft Condensed Matter · Physics 2013-03-25 I. Vancea , U. Thiele , E. Pauliac-Vaujour , A. Stannard , C. P. Martin , M. O. Blunt , P. J. Moriarty

We perform the analysis of predictions of a classical density functional theory for associating fluids with different association strength concerned with wetting of solid surfaces. The four associating sites water-like models with…

Soft Condensed Matter · Physics 2024-04-01 A. Kozina , M. Aguilar , O. Pizio , S. Sokołowski

The persistence length of macromolecules is one of their basic characteristics, describing their intrinsic local stiffness. However, it is difficult to extract this length from physical properties of the polymers, different recipes may give…

Soft Condensed Matter · Physics 2013-03-12 Hsiao-Ping Hsu , Wolfgang Paul , Kurt Binder

Molecular dynamics simulations have been employed to study the formation of a physical (thermoreversible) gel by amphiphilic A-B-A triblock copolymers in aqueous solution. In order to mimic the structure of hydrogel-forming polypeptides…

Soft Condensed Matter · Physics 2007-05-23 Lei Guo , Erik Luijten

Polymer chains immersed in different solvent molecules exhibit diverse properties due to multiple spatiotemporal scales and complex interactions. Using molecular dynamics simulations, we study the conformational and static properties of…

Soft Condensed Matter · Physics 2024-07-08 Hong-Yao Li , Bokai Zhang , Zhi-Yong Wang

Protein folding, peptide aggregation and crystallization, as well as adsorption of molecules on soft or solid substrates have an essential feature in common: In all these processes, structure formation is guided by a collective, cooperative…

Statistical Mechanics · Physics 2009-02-12 Michael Bachmann , Wolfhard Janke

Protein-stabilised emulsions can be seen as mixtures of unadsorbed proteins and of protein-stabilised droplets. To identify the contributions of these two components to the overall viscosity of sodium caseinate o/w emulsions, the…

Soft Condensed Matter · Physics 2019-01-30 Marion Roullet , Paul S. Clegg , William J. Frith

The free energy landscape of a protein-like chain in a fluid was studied by combining discontinuous molecular dynamics and parallel tempering. The model protein is a repeating sequence of four different beads, with interactions mimicking…

Soft Condensed Matter · Physics 2011-12-16 Hanif Bayat Movahed , Ramses van Zon , Jeremy Schofield

We perform Monte Carlo simulations to study the elastic properties of the helix-coil worm-like chain model of alpha-helical polypeptides. In this model the secondary structure enters as a scalar (Ising like) variable that controls the local…

Soft Condensed Matter · Physics 2007-05-23 Buddhapriya Chakrabarti , Alex J. Levine

Soft particles display highly versatile properties with respect to hard colloids, even more so at fluid-fluid interfaces. In particular, microgels, consisting of a cross-linked polymer network, are able to deform and flatten upon adsorption…

We investigate the properties of liquid ${}^4$He in both the normal and superfluid phases using path integral Monte Carlo simulations and recently developed ab initio potentials that incorporate pair, three-body, and four-body interactions.…

Other Condensed Matter · Physics 2025-03-18 Tommaso Morresi , Giovanni Garberoglio

Elastomeric pressure-sensitive adhesives (PSAs) form adhesive bonds under light pressure. Liquid crystal elastomers (LCEs) are exciting PSA candidates as they can impart both anisotropy and temperature-dependence to adhesion, but the full…

Soft Condensed Matter · Physics 2025-07-11 Aidan Street , Devesh Mistry , Johan Mattsson , Helen F. Gleeson

The deposition of a metal on a foreign substrate is studied by means of grand canonical Monte Carlo simulations and a lattice-gas model with pair potential interactions between nearest neighbors. The influence of temperature and surface…

Statistical Mechanics · Physics 2009-11-13 M. Cecilia Gimenez , Antonio J. Ramirez-Pastor , Ezequiel P. M. Leiva

Low temperature structural and superfluid properties of $^4$He confined in cylindrical nanopores are theoretically investigated by means of first principle Quantum Monte Carlo (QMC) simulations. We vary the density of $^4$He inside the…

Mesoscale and Nanoscale Physics · Physics 2022-02-03 Andrea Nava , Domenico Giuliano , Phong H. Nguyen , Massimo Boninsegni

We present a coarse-grained model for ionic surfactants in explicit aqueous solutions, and study by computer simulation both the impact of water content on the morphology of the system, and the consequent effect of the formed interfaces on…

Soft Condensed Matter · Physics 2015-03-16 Samuel Hanot , Sandrine Lyonnard , Stefano Mossa

Salt bridges are known to be important for the stability of protein conformation, but up to now it has been difficult to study their geometry in solution. Here we characterize the spatial structure of a model salt bridge between guanidinium…

Chemical Physics · Physics 2014-10-15 Adriana Huerta-Viga , Sérgio R. Domingos , Saeed Amirjalayer , Sander Woutersen

Confinement is a versatile and well-established tool to study the properties of polymers either to understand biological processes or to develop new nano-biomaterials. We investigate the conformations of a semiflexible polymer ring in weak…

Soft Condensed Matter · Physics 2010-06-25 Katja Ostermeir , Karen Alim , Erwin Frey

We present a ``coarse molecular dynamics'' approach and apply it to studying the kinetics and thermodynamics of a peptide fragment dissolved in water. Short bursts of appropriately initialized simulations are used to infer the deterministic…

Chemical Physics · Physics 2009-11-07 Gerhard Hummer , Ioannis G. Kevrekidis