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The stochastic simulation of biological systems is an increasingly popular technique in bioinformatics. It often is an enlightening technique, which may however result in being computational expensive. We discuss the main opportunities to…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-17 Marco Aldinucci , Mario Coppo , Ferruccio Damiani , Maurizio Drocco , Massimo Torquati , Angelo Troina

Verification of microkernels, device drivers, and crypto routines requires analyses at the binary level. In order to automate these analyses, in the last years several binary analysis platforms have been introduced. These platforms share a…

Programming Languages · Computer Science 2019-01-23 Andreas Lindner , Roberto Guanciale , Roberto Metere

C/C++/OpenCL-based high-level synthesis (HLS) becomes more and more popular for field-programmable gate array (FPGA) accelerators in many application domains in recent years, thanks to its competitive quality of results (QoR) and short…

Hardware Architecture · Computer Science 2021-05-07 Yuze Chi , Licheng Guo , Jason Lau , Young-kyu Choi , Jie Wang , Jason Cong

FPGA overlays are commonly implemented as coarse-grained reconfigurable architectures with a goal to improve designers' productivity through balancing flexibility and ease of configuration of the underlying fabric. To truly facilitate full…

Hardware Architecture · Computer Science 2016-06-22 Ho-Cheung Ng , Cheng Liu , Hayden Kwok-Hay So

The rapid advancements in AI, scientific computing, and high-performance computing (HPC) have driven the need for versatile and efficient hardware accelerators. Existing tools like SCALE-Sim v2 provide valuable cycle-accurate simulations…

Performance · Computer Science 2025-05-12 Ritik Raj , Sarbartha Banerjee , Nikhil Chandra , Zishen Wan , Jianming Tong , Ananda Samajdar , Tushar Krishna

Legacy codes are in ubiquitous use in scientific simulations; they are well-tested and there is significant time investment in their use. However, one challenge is the adoption of new, sometimes incompatible computing paradigms, such as GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-11 Nicolas Nytko , Andrew Reisner , J. David Moulton , Luke N. Olson , Matthew West

Dynamic Translation (DT) is a sophisticated technique that allows the implementation of high-performance emulators and high-level-language virtual machines. In this technique, the guest code is compiled dynamically at runtime. Consequently,…

Programming Languages · Computer Science 2020-09-01 Vanderson Martins do Rosario , Raphael Zinsly , Sandro Rigo , Edson Borin

With the push towards Exascale computing and data-driven methods, problem sizes have increased dramatically, increasing the computational requirements of the underlying algorithms. This has led to a push to offload computations to general…

Software Engineering · Computer Science 2025-12-18 Benedict Short , Ian McInerney , John Wickerson

Synaptic delay has attracted significant attention in neural network dynamics for integrating and processing complex spatiotemporal information. This paper introduces a high-throughput Spiking Neural Network (SNN) processor that supports…

Neural and Evolutionary Computing · Computer Science 2025-11-07 Faquan Chen , Qingyang Tian , Ziren Wu , Rendong Ying , Fei Wen , Peilin Liu

As the complexity of the scan algorithm is dependent on the number of design registers, large SoC scan designs can no longer be verified in RTL simulation unless partitioned into smaller sub-blocks. This paper proposes a methodology to…

Other Computer Science · Computer Science 2014-09-12 Bill Jason Tomas , Yingtao Jiang , Mei Yang

Modern physics experiments often utilize FPGA-based systems for real-time data acquisition. Integrated analog electronics demand for complex calibration routines. Furthermore, versatile configuration and control of the whole system is a key…

Systems and Control · Electrical Eng. & Systems 2021-09-01 Nick Karcher , Richard Gebauer , Robin Bauknecht , Rainer Illichmann , Oliver Sander

This study explores the use of INT8-based emulation for accelerating traditional FP64-based HPC workloads on modern GPU architectures. Through SCILIB-Accel automatic BLAS offload tool for cache-coherent Unified Memory Architecture, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-01 Hang Liu , Junjie Li , Yinzhi Wang , Niraj K. Nepal , Yang Wang

We propose a novel and efficient, custom frame synchronization architecture aimed at rapid deployment on any hardware platform. Frame synchronization is the process of discerning valid data frames from an incoming transmission and in this…

Signal Processing · Electrical Eng. & Systems 2024-04-30 Dimitris Nikolaidis

This work presents AEQUAM (Area Efficient QUAntum eMulation), a toolchain that enables faster and more accessible quantum circuit verification. It consists of a compiler that translates OpenQASM 2.0 into RISC-like instructions, Cython…

Quantum Physics · Physics 2025-07-28 Lorenzo Lagostina , Deborah Volpe , Maurizio Zamboni , Giovanna Turvani

Computation of optimal cycle mean in a directed weighted graph has many applications in program analysis, performance verification in particular. In this paper we propose a data-parallel algorithmic solution to the problem and show how the…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-11-04 Jiří Barnat , Petr Bauch , Luboš Brim , Milan Češka

High Performance Computing is notorious for its long and expensive software development cycle. To address this challenge, we present Bind: a "partitioned global workflow" parallel programming model for C++ applications that enables quick…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-06-16 Alex Kosenkov , Matthias Troyer

Binary code analysis is widely used to assess a program's correctness, performance, and provenance. Binary analysis applications often construct control flow graphs, analyze data flow, and use debugging information to understand how machine…

In this article we present PARSIR (PARallel SImulation Runner), a package that enables the effective exploitation of shared-memory multi-processor machines for running discrete event simulation models. PARSIR is a compile/run-time…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-02 Francesco Quaglia

The Shared Source CLI (SSCLI), also known as Rotor, is an implementation of the CLI released by Microsoft in source code. Rotor includes a single pass just-in-time compiler that generates non-optimized code for Intel IA-32 and IBM PowerPC…

Programming Languages · Computer Science 2024-11-15 João H. Trindade , José C. Silva

The evaluation of new microprocessor designs is constrained by slow, cycle-accurate simulators that rely on unrepresentative benchmark traces. This paper introduces a novel deep learning framework for high-fidelity, ``in-the-wild''…

Hardware Architecture · Computer Science 2025-10-01 Shayne Wadle , Yanxin Zhang , Vikas Singh , Karthikeyan Sankaralingam