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In this paper, we develop a general theory for the estimation of the transition probabilities of reversible Markov chains using the maximum entropy principle. A broad range of physical models can be studied within this approach. We use…

Statistical Mechanics · Physics 2015-05-14 Erik Van der Straeten

Fitting network models to neural activity is an important tool in neuroscience. A popular approach is to model a brain area with a probabilistic recurrent spiking network whose parameters maximize the likelihood of the recorded activity.…

Machine Learning · Statistics 2021-11-16 Guillaume Bellec , Shuqi Wang , Alireza Modirshanechi , Johanni Brea , Wulfram Gerstner

Learning synaptic weights of spiking neural network (SNN) models that can reproduce target spike trains from provided neural firing data is a central problem in computational neuroscience and spike-based computing. The discovery of the…

Neural and Evolutionary Computing · Computer Science 2019-10-10 Bryce Bagley , Blake Bordelon , Benjamin Moseley , Ralf Wessel

Information about external world is delivered to the brain in the form of structured in time spike trains. During further processing in higher areas, information is subjected to a certain condensation process, which results in formation of…

Neurons and Cognition · Quantitative Biology 2015-03-17 Alexander K. Vidybida

Neurons in the central nervous system communicate with each other with the help of series of Action Potentials, or spike trains. Various studies have shown that neurons encode information in different features of spike trains, such as the…

Neurons and Cognition · Quantitative Biology 2014-10-21 Shubhanshu Shekhar , Kaushik Majumdar

Spike generation in neurons produces a temporal point process, whose statistics is governed by intrinsic phenomena and the external incoming inputs to be coded. In particular, spike-evoked adaptation currents support a slow temporal process…

Neurons and Cognition · Quantitative Biology 2016-10-31 Eugenio Urdapilleta

This paper proposes a two-step spike encoding scheme, which consists of the source encoding and the process encoding for a high energy-efficient spiking-neural-network (SNN) acceleration. The eigen-train generation and its superposition…

Hardware Architecture · Computer Science 2022-02-09 Sangyeob Kim , Sangjin Kim , Soyeon Um , Soyeon Kim , Hoi-Jun Yoo

This study explores how the selection of neuron models and learning rules impacts the classification performance of Spiking Neural Networks (SNNs), with a focus on applications in bio-signal processing. We compare biologically inspired…

Neurons and Cognition · Quantitative Biology 2025-09-10 Zofia Rudnicka , Janusz Szczepanski , Agnieszka Pregowska

Environmental signals sensed by nervous systems are often represented in spike trains carried from sensory neurons to higher neural functions where decisions and functional actions occur. Information about the environmental stimulus is…

Biological Physics · Physics 2007-05-23 Henry D. I. Abarbanel , Evren C. Tumer

An algorithmic limit of compressed sensing or related variable-selection problems is analytically evaluated when a design matrix is given by an overcomplete random matrix. The replica method from statistical mechanics is employed to derive…

Disordered Systems and Neural Networks · Physics 2018-11-14 Tomoyuki Obuchi , Yoshinori Nakanishi-Ohno , Masato Okada , Yoshiyuki Kabashima

We use maximal entropy random walk (MERW) to study the trapping problem in dendrimers modeled by Cayley trees with a deep trap fixed at the central node. We derive an explicit expression for the mean first passage time from any node to the…

Statistical Mechanics · Physics 2014-06-19 Xin Peng , Zhongzhi Zhang

Here we present our Python toolbox "MR. Estimator" to reliably estimate the intrinsic timescale from electrophysiologal recordings of heavily subsampled systems. Originally intended for the analysis of time series from neuronal spiking…

Neurons and Cognition · Quantitative Biology 2021-05-11 F. P. Spitzner , J. Dehning , J. Wilting , A. Hagemann , J. P. Neto , J. Zierenberg , V. Priesemann

This paper aims to overcome a major obstacle in scaling RL for reasoning with LLMs, namely the collapse of policy entropy. Such phenomenon is consistently observed across vast RL runs without entropy intervention, where the policy entropy…

Spiking neural networks (SNNs) are the third generation of neural networks and can explore both rate and temporal coding for energy-efficient event-driven computation. However, the decision accuracy of existing SNN designs is contingent…

Neural and Evolutionary Computing · Computer Science 2020-02-25 Changqing Xu , Wenrui Zhang , Yu Liu , Peng Li

Point process modeling is gaining increasing attention, as point process type data are emerging in numerous scientific applications. In this article, motivated by a neuronal spike trains study, we propose a novel point process regression…

Methodology · Statistics 2020-12-10 Xiwei Tang , Lexin Li

Decoding strategies play a central role in shaping the reasoning ability of large language models (LLMs). Traditional methods such as greedy decoding and beam search often suffer from error propagation, while sampling-based approaches…

We study the sample complexity of entropic optimal transport in high dimensions using computationally efficient plug-in estimators. We significantly advance the state of the art by establishing dimension-free, parametric rates for…

Statistics Theory · Mathematics 2022-06-28 Philippe Rigollet , Austin J. Stromme

Large reasoning models have demonstrated remarkable performance on complex reasoning tasks, yet the excessive length of their chain-of-thought outputs remains a major practical bottleneck due to high computation cost and poor deployability.…

Computation and Language · Computer Science 2025-11-25 Hourun Zhu , Yang Gao , Wenlong Fei , Jiawei Li , Huashan Sun

We present an application of autoregressive neural networks to Monte Carlo simulations of quantum spin chains using the correspondence with classical two-dimensional spin systems. We use a hierarchy of neural networks capable of estimating…

Quantum Physics · Physics 2026-05-19 Piotr Białas , Piotr Korcyl , Tomasz Stebel , Dawid Zapolski

We propose a solution to the weight transport problem, which questions the biological plausibility of the backpropagation algorithm. We derive our method based upon a theoretical analysis of the (approximate) dynamics of leaky…

Neurons and Cognition · Quantitative Biology 2021-08-12 Nasir Ahmad , Luca Ambrogioni , Marcel A. J. van Gerven